Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq78 122 1e-22
seq79 95.1 2e-14
>seq78
Length=1347436
Score = 122 bits (134), Expect = 1e-22
Identities = 473/737 (64%), Gaps = 15/737 (2%)
Strand=Plus/Plus
Query 159749 AACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC 159808
|| ||||| || ||||| || ||||| |||||| ||| | || || || || ||
Sbjct 284376 AATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAGAAGA 284435
Query 159809 CTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATC 159868
||| || | || || | || || ||||| ||||| |||| ||||| || | ||||
Sbjct 284436 CTACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAATAATC 284495
Query 159869 TG-----CGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
| | | | || ||| || | | ||| | || |||| | ||| || | |
Sbjct 284496 TTTTCAACAACAGAC-TTCTTAGGTCTG-TTGAC---AAGGTGGCC---AAAAAGCAAAC 284547
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| || || || ||||| || || || ||||| || ||||| || || | | | |
Sbjct 284548 AAGCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAAC 284607
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| ||||| | |||||| || | |||||| || ||||| | ||| || ||||
Sbjct 284608 CAGGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGA 284667
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG-TCATGG 160102
| ||||| || || || || || ||||| | |||| |||| | | ||| | ||| |
Sbjct 284668 TACCCTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGA-TTGATCATCAGAG 284726
Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162
|||| || |||||| ||||||||||| || || || ||| || | || |
Sbjct 284727 ATCCAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCATGG 284786
Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222
||||| || |||||| |||||||||| |||| |||| || ||||| |
Sbjct 284787 AACAAGAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAAGTC 284846
Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282
|| || || | ||| || || || || || ||||||| | | ||||| || |
Sbjct 284847 TCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAATC 284906
Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342
|| ||||| | ||| || | | | || || |||| || | || |||| ||| |||
Sbjct 284907 TGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAGCA 284966
Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG 160402
|||||||| | ||| ||||||| || |||||| || | || || | | |||||||
Sbjct 284967 AAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAGACGGTGTTCCCAG 285026
Query 160403 TGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTT 160462
| | | || | | | ||||| |||||| || |||| | |||| |||
Sbjct 285027 TCACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAAGAGGCCTCAGCTTGC 285086
Query 160463 TTGTACATGGCCCAGAT 160479
|||||||| ||||||
Sbjct 285087 TTGTACATTTGCCAGAT 285103
>seq79
Length=299291
Score = 95.1 bits (104), Expect = 2e-14
Identities = 193/284 (68%), Gaps = 6/284 (2%)
Strand=Plus/Minus
Query 205112 CCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGT---CTTTCACCCTCTCC 205168
|| ||||| | || || ||||||| || ||| ||| |||| | || || |||| |
Sbjct 118744 CCAGGACACTCATTAGGGCACATCAAAGTCCA-ATCC--TCGTTAGCCTTGACTCTCTTC 118688
Query 205169 ATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCT 205228
|| |||| |||| |||||| ||| | | |||| ||| | ||| | | | | || |
Sbjct 118687 ATGAACAAGTCGGGGATCCAAAGGGCCAAGAACAAATCTCTGGCACGGACTTCTTCCTTA 118628
Query 205229 CCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCAC 205288
|| |||||||| |||||| | | | || ||| ||||||| ||||| || ||
Sbjct 118627 CCGTGGTTCTTTCGCAAGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTAC 118568
Query 205289 ACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTG 205348
| ||| | || ||||| |||||||| ||||| ||||| || | || | ||||
Sbjct 118567 ATGGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTTGTTG 118508
Query 205349 AAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392
||||||| || ||| || || | |||||| | || ||||| ||
Sbjct 118507 AAAACTCTCAACATAGGGACAATACCGTTAGAAGTACCGTTAGT 118464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153550052960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |