Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq78 122 1e-22 seq79 95.1 2e-14 >seq78 Length=1347436 Score = 122 bits (134), Expect = 1e-22 Identities = 473/737 (64%), Gaps = 15/737 (2%) Strand=Plus/Plus Query 159749 AACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC 159808 || ||||| || ||||| || ||||| |||||| ||| | || || || || || Sbjct 284376 AATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAGAAGA 284435 Query 159809 CTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATC 159868 ||| || | || || | || || ||||| ||||| |||| ||||| || | |||| Sbjct 284436 CTACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAATAATC 284495 Query 159869 TG-----CGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 | | | | || ||| || | | ||| | || |||| | ||| || | | Sbjct 284496 TTTTCAACAACAGAC-TTCTTAGGTCTG-TTGAC---AAGGTGGCC---AAAAAGCAAAC 284547 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | || || || ||||| || || || ||||| || ||||| || || | | | | Sbjct 284548 AAGCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAAC 284607 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | ||||| | |||||| || | |||||| || ||||| | ||| || |||| Sbjct 284608 CAGGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGA 284667 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG-TCATGG 160102 | ||||| || || || || || ||||| | |||| |||| | | ||| | ||| | Sbjct 284668 TACCCTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGA-TTGATCATCAGAG 284726 Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162 |||| || |||||| ||||||||||| || || || ||| || | || | Sbjct 284727 ATCCAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCATGG 284786 Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222 ||||| || |||||| |||||||||| |||| |||| || ||||| | Sbjct 284787 AACAAGAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAAGTC 284846 Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282 || || || | ||| || || || || || ||||||| | | ||||| || | Sbjct 284847 TCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAATC 284906 Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342 || ||||| | ||| || | | | || || |||| || | || |||| ||| ||| Sbjct 284907 TGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAGCA 284966 Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG 160402 |||||||| | ||| ||||||| || |||||| || | || || | | ||||||| Sbjct 284967 AAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAGACGGTGTTCCCAG 285026 Query 160403 TGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTT 160462 | | | || | | | ||||| |||||| || |||| | |||| ||| Sbjct 285027 TCACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAAGAGGCCTCAGCTTGC 285086 Query 160463 TTGTACATGGCCCAGAT 160479 |||||||| |||||| Sbjct 285087 TTGTACATTTGCCAGAT 285103 >seq79 Length=299291 Score = 95.1 bits (104), Expect = 2e-14 Identities = 193/284 (68%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 205112 CCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGT---CTTTCACCCTCTCC 205168 || ||||| | || || ||||||| || ||| ||| |||| | || || |||| | Sbjct 118744 CCAGGACACTCATTAGGGCACATCAAAGTCCA-ATCC--TCGTTAGCCTTGACTCTCTTC 118688 Query 205169 ATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCT 205228 || |||| |||| |||||| ||| | | |||| ||| | ||| | | | | || | Sbjct 118687 ATGAACAAGTCGGGGATCCAAAGGGCCAAGAACAAATCTCTGGCACGGACTTCTTCCTTA 118628 Query 205229 CCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCAC 205288 || |||||||| |||||| | | | || ||| ||||||| ||||| || || Sbjct 118627 CCGTGGTTCTTTCGCAAGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTAC 118568 Query 205289 ACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTG 205348 | ||| | || ||||| |||||||| ||||| ||||| || | || | |||| Sbjct 118567 ATGGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTTGTTG 118508 Query 205349 AAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392 ||||||| || ||| || || | |||||| | || ||||| || Sbjct 118507 AAAACTCTCAACATAGGGACAATACCGTTAGAAGTACCGTTAGT 118464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153550052960