Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq32 111 2e-19 seq90 95.1 1e-14 seq111 82.4 9e-11 >seq32 Length=396137 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||||||||| || || | | || || || ||||| || ||||| Sbjct 380786 CTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCCTCAAGTTGCTTACCAGCGAA 380845 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| ||||| | || | || ||||||||| |||||| |||| | ||| Sbjct 380846 AATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTT-AACGT 380904 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| || || || || || || | Sbjct 380905 TGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGA 380964 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 380965 CGAAGATTTGCAT 380977 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || | |||| || | |||||| || ||||| Sbjct 380558 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCGAA 380617 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || || ||||| | || | || ||||||||| |||||| |||||| ||| Sbjct 380618 GATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGT 380676 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | |||||||| ||||| ||||| || || | Sbjct 380677 TGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGA 380736 Query 46581 CAAAGATTTGCAT 46593 ||||||||||||| Sbjct 380737 CAAAGATTTGCAT 380749 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| ||||| || || ||||| || | || ||||| ||||| || ||||| Sbjct 381015 TCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAA 381074 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||| ||||| | || | | ||||||||| |||||| |||| | | Sbjct 381075 ATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTAACATTA 381134 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||||| || || | |||||||| || || |||| || || || Sbjct 381135 TCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTACCAGTCAAGGTCTTGACG 381194 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 381195 AAGATTTGCAT 381205 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| ||||| || || ||||| || |||| || || ||||| || ||||| Sbjct 381699 TCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCCAGTTGCTTACCAGCGAAA 381758 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||| ||||| | || | | |||||||| ||||| |||||| ||| Sbjct 381759 ATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGA-CGTT 381817 Query 46523 GCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || || || || | |||||||| || || || || || || || Sbjct 381818 GTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTACCAGTAAGGGTCTTTAC 381877 Query 46582 AAAGATTTGCATTTTG 46597 |||||||||||| || Sbjct 381878 GAAGATTTGCATTATG 381893 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| || ||||| || | || ||||| |||||||| || || Sbjct 381470 CTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCCTCGAGTTGCTTGCCAGCAAA 381529 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | || ||||| | || | | ||||||||| |||||| |||||| | Sbjct 381530 GATGAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATT 381589 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || || ||||| || || | || || || ||||| |||| || || || Sbjct 381590 GTCAATAGTATCAGAAGATTCGACCTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTGAC 381649 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 381650 GAAGATTTGCAT 381661 >seq90 Length=207308 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || || ||||| || |||| || || ||||| || || || Sbjct 159098 CTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCCTCAAGTTGCTTACCAGCAAA 159157 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || || || || | || | | ||||||||| |||||| |||||| | Sbjct 159158 GATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 159217 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | |||||||| || || || || || || || Sbjct 159218 GTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCGGTAAGGGTCTTGAC 159277 Query 46582 AAAGATTTGCAT 46593 || |||||||| Sbjct 159278 GAAAATTTGCAT 159289 >seq111 Length=751517 Score = 82.4 bits (90), Expect = 9e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| ||||| | || || || | ||| |||||||||||| |||||||| || Sbjct 299256 CCACCTCTCAAACGGAGGACAAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAA 299197 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || ||||| ||||| || ||||| || | || || || || | || Sbjct 299196 AGGGTTCTGCCATCTTCGAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGGGGA 299137 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||||||||| |||||| |||||| | | | |||||| || || || Sbjct 299136 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCGGAAGACTCGACC 299077 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 || | |||||||| || || || || || || || || Sbjct 299076 TCGAGGGTGATGGTCTTACCAGTAAGGGTCTTGACGAA 299039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237227130320