Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq166 159 1e-33
seq32 111 6e-19
seq111 107 8e-18
seq90 98.7 4e-15
seq104 93.3 2e-13
seq82 93.3 2e-13
>seq166
Length=544740
Score = 159 bits (176), Expect = 1e-33
Identities = 517/790 (65%), Gaps = 27/790 (3%)
Strand=Plus/Plus
Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTG--TTTACCAAAATGGAAATGT 450975
|||| |||||| | || || |||| || ||||||| ||| |||| || | ||
Sbjct 457724 TTGGTATTGATTTGGGTACTACCTACTCCTGTGTAGCCCACTTTTCCAA--TGATAGAGT 457781
Query 450976 AGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGA 451035
|||||||| || ||||||||||| |||| |||||||| | || ||| || ||
Sbjct 457782 TGAAATTATTGCCAATGACCAAGGTAATAGAACCACTCCTTCTTTCGTTGCTTTCACTGA 457841
Query 451036 TTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAA--TGCCAAAA 451091
||| || | | | || | |||||||| ||||| | | | || ||||||
Sbjct 457842 TTCCGAGCGTTTAATTGGTGATGCTGCTAAGAATCAA-GCTGCCATGAACCCTGCCAA-- 457898
Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151
||| || | |||||| || ||||| ||||| | | ||| |||| | || ||||
Sbjct 457899 -CACTGTTTTTGATGCCAAGCGTTTGATTGGTAGAAAGTACACTGATCCTGAGGTTCAAA 457957
Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211
|| | || ||| | | | || || | | || ||||| | |||||||
Sbjct 457958 GTGATATTAAGCACTTCCCCTTCAAGGTTGTTGACAAGGCCGGCAAGCCTCAAATTCAAG 458017
Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271
| | | || ||||| || ||| ||||||||||||| || |||||||| || |
Sbjct 458018 TCGAGTTCAAGGGTGAGGAGAAGGTTTTCACTCCTGAAGAAATCTCTTCTATGGTCCTCA 458077
Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331
| || ||||| || || || || | | ||| | | |||| |||| || ||||
Sbjct 458078 CCAAGATGAAGGAGACTGCTGAGGGTTTCTTGGGTGGTACTGTTAGCAATGCTGTCATTA 458137
Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391
|||| || ||||| |||||||| | ||||| ||||| || || ||||| || | ||| |
Sbjct 458138 CTGTCCCTGCTTACTTCAATGACTCTCAACGTCAAGCTACCAAGGATGCCGGTCTTATCG 458197
Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451
||||| | |||||||| || || || || || ||||| || ||||| | || || ||
Sbjct 458198 CTGGTCTTAATGTTCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATTGCTTACGG-T 458256
Query 451452 TAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510
| ||| | | ||| | | || || || | || | || ||||| ||||| ||
Sbjct 458257 TTGGACA---AGAAGTCTGAGGCTGAGAAGAACGTCTTGATTTTCGATTTGGGTGGTGGT 458313
Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570
||| ||| || | | | ||||||||||| | || || || ||||| || |
Sbjct 458314 ACTTTCGATGTCTCCCTCTTGACTATTGAAGATGGTATCTTCGAGGTTAAGGCTACTGCT 458373
Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGA----ATGGTTGAA 451626
||||| ||||| | || ||||||||| | ||| | |||| | | ||||
Sbjct 458374 GGTGACACTCACTTGGGTGGTGAAGATTTCGATCACCGTCTTGTCAACCACTTCGTTG-- 458431
Query 451627 AACTGATGTTCAACGAAAACTAAAAGTA-GATATTTCTACTAACCAAAAAGCACTTAGAC 451685
|||| ||||| ||| | ||| | ||| ||||||| ||||||| ||| |||||||
Sbjct 458432 --CTGA-ATTCAAGAGAAAGAACAAGAAGGATCTTTCTACCAACCAAAGAGCCCTTAGAC 458488
Query 451686 GTCTTAAAAC 451695
|| | | |||
Sbjct 458489 GTTTGAGAAC 458498
>seq32
Length=396137
Score = 111 bits (122), Expect = 6e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || |||||||| || || || ||||| || || || ||
Sbjct 380977 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTTGAGGTCGAGTCTTCC 380918
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || |||| || || ||||| ||||| || ||||| || || |||
Sbjct 380917 GACACCATCGACAACGTTAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 380858
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||||| |||||| | || || |||||||| ||||||||||| | | || || ||
Sbjct 380857 CAGCGTTTGATTTTCGCTGGTAAGCAACTTGAGGATGGAAGAACCCTTTCCGACTACAAC 380798
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || || ||||||||
Sbjct 380797 ATCCAAAAGGAGTCCACTCTCCACTTAGT 380769
>seq111
Length=751517
Score = 107 bits (118), Expect = 8e-18
Identities = 145/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 391052 GAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGA 391111
||| | |||||| || || || |||||||| || || || || || || || || || ||
Sbjct 299032 GAACAGTTTCGTCAAGACCCTTACTGGTAAGACCATCACCCTCGAGGTCGAGTCTTCCGA 299091
Query 391112 TAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACA 391171
| |||||| | | || || || || || |||||||||||||| || ||||||||
Sbjct 299092 CACCATTGACAATGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAACA 299151
Query 391172 ACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATAT 391231
|||| | || ||| | || || ||||| |||||||| ||||| | | || || || ||
Sbjct 299152 ACGTCTTATCTTCGCTGGTAAGCAACTCGAAGATGGCAGAACCCTTTCTGACTACAACAT 299211
Query 391232 TGATAAGGATGCAACACTTCAC 391253
| ||||| | || ||||||
Sbjct 299212 CCAAAAGGAGTCTACTCTTCAC 299233
>seq90
Length=207308
Score = 98.7 bits (108), Expect = 4e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || || || ||||| || || || || || ||||| || ||
Sbjct 159289 ATGCAAATTTTCGTCAAGACCCTTACCGGTAAGACCATCACCCTCGAGGTTGAGTCTTCC 159230
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | || || || ||||| ||||| |||||||| || ||||||
Sbjct 159229 GACACCATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAA 159170
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || || | || || |||||||| || || | ||| | | ||||| ||
Sbjct 159169 CAACGTTTGATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACTCTTTCTGATTACAAC 159110
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || || |||
Sbjct 159109 ATCCAAAAGGAGTCTACTCTCCAC 159086
>seq104
Length=94482
Score = 93.3 bits (102), Expect = 2e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 412279 ACACCCTTTTTTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTT 412338
||||| ||| | ||||| | || ||||||||||||||| || | ||||| || |
Sbjct 8444 ACACCTTTTCTGCCAAATCTTCCTGATCTACCAATTCTATGGATGTAGTTTTCACGACTA 8385
Query 412339 TTAGGTAAATCATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAAT 412398
|| |||||||||||||||||||| | | |||| | | ||| || || | || |
Sbjct 8384 TTTGGTAAATCATAATTTATAACGAGTGATACCTGTTGTACATCGATACCTCTAGCCCAG 8325
Query 412399 AAATCAGTTGTTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTT 412458
| |||||| | | ||| | ||| | ||||||| || ||||| | | ||||| | ||
Sbjct 8324 ACATCAGTCGAAATTAATACTCGAGAGTTTCCCTGTCGGAATTCTTGCATAATTTCATTT 8265
Query 412459 CTTTCTTCTTGTTC 412472
|||| || ||||||
Sbjct 8264 CTTTGTTTTTGTTC 8251
>seq82
Length=262920
Score = 93.3 bits (102), Expect = 2e-13
Identities = 103/135 (76%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867
|| ||||| ||||| || | ||||||||| | ||||| || ||||| || ||||| ||
Sbjct 143204 GTGAATACGACAGTCTTGGCAGGCATATTAAGACCAATGGAGAAAGTCTCTGTTGCAAAT 143263
Query 420868 AAAACTTTAATTA-AtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926
| ||||| || | | || ||| | ||||||| |||| || ||||||||||| || |
Sbjct 143264 AGCACTTTGATAAGACCTTCTTGGA-AAAGAATCTCAATAACCTCTTTTAAAATTGGCAA 143322
Query 420927 TATACCAGAATGATG 420941
|| ||||||||||||
Sbjct 143323 TAAACCAGAATGATG 143337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975714197893928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |