Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq78 120 4e-22
seq155 118 1e-21
seq43 89.7 6e-13
>seq78
Length=1347436
Score = 120 bits (132), Expect = 4e-22
Identities = 342/510 (67%), Gaps = 23/510 (5%)
Strand=Plus/Minus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGG-AAGAC--TCTAAAT 101873
||||||||||||||| | ||||| ||||||| | || ||| || || ||| |||
Sbjct 285067 TGGACTGCTGAAGAGATTGATCTTGGAAAGGATATTAGTGACTGGGAACACCGTCTTAAT 285008
Query 101874 GAAAATGAAAAGAAATTCATAAAATACA---TCCTGGCATTCTTTGCTGGGTCCGATGGA 101930
|| |||| || |||| | | | | || || |||||||||| ||||||||
Sbjct 285007 GATGATGA---GAGATTCTTTATCTCTCGTGTGCTCGCTTTCTTTGCTGCCTCCGATGGT 284951
Query 101931 ATTGTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAG 101989
||||| |||||| | | | | || ||| |||||| || || | |||| || |
Sbjct 284950 ATTGTCAATGAGAACCTTGTTGAGAGATTCTCTGGTGAGGTCCAGATTC-CTGAGGCCAA 284892
Query 101990 ATCTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAAC 102048
| |||||| | | ||| |||| ||| | | | |||| ||||| ||| ||
Sbjct 284891 GTGTTTCTACGGATTCCAAA-TCATGATGGAGAATATCCATGCTGAGACTTACTCCTTAC 284833
Query 102049 TCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCA-A 102107
| || || | ||||| ||||||| | ||| || | || | || || | |
Sbjct 284832 TTATTGATACTTATATCAAGGATGCTAAGGAGGCTAACTTCTTGTTCCATGCTATTGATA 284773
Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAG 102164
||| |||| |||||| | ||||| || || ||||| | | ||| | |||| |
Sbjct 284772 ACA-TTCCTTGTATTAAGAAGAAGGCTGACTGGGCCCTAACTTGGATCTCTGATGATCAA 284714
Query 102165 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 102224
|| | ||||||||||||| ||| | || || || ||| ||||||||||||||||||
Sbjct 284713 TC---TACCTTTGCTGAGCGTCTCGTTGCTTTCGCTGCTGTCGAGGGTATCTTCTTCTCT 284657
Query 102225 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283
||||| || ||| ||| | |||| | |||||||| ||||| ||||| ||| | ||
Sbjct 284656 GGTTCATT-TGCTAGTATCTTTTGGTTGAAGAAGCGTGGTCTTATGCCTGGTTTGACTTT 284598
Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGG 102313
||| || ||| | || |||||||| || ||
Sbjct 284597 CTCTAATGAGTTGATTTCTCGTGATGAAGG 284568
>seq155
Length=566151
Score = 118 bits (130), Expect = 1e-21
Identities = 849/1355 (63%), Gaps = 51/1355 (4%)
Strand=Plus/Plus
Query 112008 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 112067
||| | || || ||||| | ||||| | | ||| | || ||||| ||||| ||
Sbjct 482428 TATTTAGAACCTTGGCATGGTGATATATTCCAATTCTTAGACTTGCGGAAAAACCATGGC 482487
Query 112068 GATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 112127
| |||||| | | || ||||| || | |||||||||||| || ||| | || |||
Sbjct 482488 AAAGAGGAGCTGAGAGCTCGAGATCTATTTTACGCTCTCTGGATCCCGGATTTGTTTATG 482547
Query 112128 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTC 112187
|||| ||| | || | || | |||| ||| |||| | ||| ||||||| || |
Sbjct 482548 AAGAAAGTCCACGATAATGAAGAATGGTGTCTTTTTTCTAATGACCAGGCACCTGGCTTG 482607
Query 112188 TCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGG 112247
| |||| || || || |||||||| | |||| || ||| | |||| |||
Sbjct 482608 GCAGATGTTTATGGAGATGAATTTGAAGCGTTATACAATCGATATGAGAAGGAAAATCGA 482667
Query 112248 GCGACTGCG-ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCG 112305
| | |||| | || ||| | || | | ||| || || || | | || | ||
Sbjct 482668 -CAATTGCGCAAAGTTAAAGCC-CAGAAGCTTTGGTTTGCGATACTAGAAGCACAGATCG 482725
Query 112306 AGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 112365
||||||||| |||| |||||| || ||||| || || |||| ||| || || || |
Sbjct 482726 AGACTGGTAATCCATTTATGCTATATAAAGATGCATGCAACCGGAAGTCAAACCAGAATA 482785
Query 112366 ATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAG 112425
|| | || || || || || | ||||| ||||| | ||| | | |
Sbjct 482786 ATCTTGGCACAATTAAATCGTCAAATTTGTGTACCGAAATAGTACAATATTCGTCTCCTG 482845
Query 112426 ATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-- 112483
||||||| ||||| ||||| ||||| || || || | || | || ||| | ||
Sbjct 482846 ATGAGACCGCTGTTTGTAATCTCGCCTCTATAGCGTTACCAACGTTTGTACACTACGACG 482905
Query 112484 --GACAA-----AGACATT---TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCA 112533
||| | || || ||| | |||||| || || |||||| | ||| |||
Sbjct 482906 AGGACGATGTTGAGGTATGGTATGACTTTGAAAAGCTTCATGAAGTTGCCAAAGTAGTCG 482965
Query 112534 CAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 112593
| | ||| || |||| | || || | ||| || ||||| || |||| | | |
Sbjct 482966 CTAGAAATCTGAACAAGATCATAGACATCAATGACTATCCCGTCGAATCTGCGAGGAGGT 483025
Query 112594 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG--TAT-TCA 112650
||||| ||| |||| | || || | | |||| |||||||| | || ||| ||| | |
Sbjct 483026 CTAATGTGAAACACAGACCCATAGCTGTCGGAGTCCAAGGATTGGCAGATACTTATATGA 483085
Query 112651 TTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTG 112710
|| || | ||||||| || ||||| | | | |||| || |||||||
Sbjct 483086 AACTGCGTATGC---CATTTGACTCGTCTGAAGCCAGATTACTTAATGTGCAAATATTTG 483142
Query 112711 AGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCAT 112770
| || || ||||| || || | ||||| | |||| | || | | | || ||||
Sbjct 483143 AAACTATATATCATGCGGCAGTCGAGGCATCTATGGAGCTAGCCAAAGAAAACGGACCAT 483202
Query 112771 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAG 112830
| || | | | ||||||||| ||||| | ||| || | ||||| ||| ||||||
Sbjct 483203 ACGATAGTTATTCGGGTTCTCCCGCTTCGAAGGGGATGTTGCAATTCGATTTGTGGG--- 483259
Query 112831 GTGAGACCAAGCTTCACTACGAC-------TGGGAC-----GCTCTCAAGGAACGC-ATC 112877
||||| | | |||| |||| |||||| | || || | | ||
Sbjct 483260 GTGAGCCTGAT-TTCAAGGCGACGGATTTATGGGACTGGGAGAGCTTAAAGCGTGATATT 483318
Query 112878 AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG--GCACCAATGCCAACAGCCTCCACCG 112935
||| || ||| | || ||||| | || ||||||||||| || || || ||
Sbjct 483319 TCCGAGTTTGGACTTAGGAAT--TCTTTAGTTGTCGCACCAATGCCCACCGCTTCGACTT 483376
Query 112936 CACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAA 112995
| ||||| | ||| || || || |||||||| ||| | || || ||| ||
Sbjct 483377 CGCAAATTCTTGGTTTCAACGAGTGTTTTGAACCAATCACATCAAATATATATACTCGAC 483436
Query 112996 GAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGT---GGATG-ACCTCAAA 113051
| ||| | || || || |||||||| | |||| || |||| | | |||
Sbjct 483437 GGGTCCTTTCTGGCGAATTCCAAATTGTCAATGAATATCTTGTAAGGGATCTAGCCCAAT 483496
Query 113052 GAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATT 113111
|| || || || ||||| | | | | || | | | ||| || ||
Sbjct 483497 TAGGTTTGT----GGAATGCTGATATCAGGCACATGATAATTAGTCAAGATGGCTCTATC 483552
Query 113112 CAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATC 113171
||||| ||| || ||||||| || | ||| || | || || | |||||| |
Sbjct 483553 CAAAACATTAATGAGATTCCAGGCGATTTGAAGGAGATATATAAGACGGCCTGGGAATTG 483612
Query 113172 AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAA 113231
| ||| | | || || |||||||| || || ||||| | |||||| || ||||
Sbjct 483613 AGCCAGAAAGTGATAATCGATATGGCCGCCGACCGCGGTCGATACATTGACCAGTCTCAA 483672
Query 113232 AGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTAC 113291
||||||||| | |||||| ||| ||| || | ||| || || |||||| | |||
Sbjct 483673 AGTATGAATATTTTCATGAAAAATCCCACTACTGGCAAACTTACTAGTATGCATTTCTAC 483732
Query 113292 AGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 113326
| ||||||||||| ||||| || || ||||||||
Sbjct 483733 GGCTGGAAGAAGGGACTCAAGACAGGAATGTATTA 483767
>seq43
Length=391780
Score = 89.7 bits (98), Expect = 6e-13
Identities = 218/325 (67%), Gaps = 4/325 (1%)
Strand=Plus/Plus
Query 16057 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTT 16116
|||| | ||||||||||||||||| || || || | || | | |||||
Sbjct 81885 TTCCAATAGCATCAATCTCATCAATAAATACAATACTAGGAGCCTCCTTACGAGCTGTAG 81944
Query 16117 CAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGG 16176
|||| ||||| | || || | || || |||||||||||||||||||| || | | |
Sbjct 81945 CAAATAGATCTCTCACCCGGCTAGCACCAACACCAACAAACATCTCCACGAATTCCGAGC 82004
Query 16177 CGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235
| || ||| || || || ||| | ||||| || ||||| || || | ||||
Sbjct 82005 CAGATACA-GAGAAAAATGGTACACCTGCCTCACCAGCTGTGGCTTTAGCAAGTAAAGTC 82063
Query 16236 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACTTCC 16294
||||| ||||| || ||| | || | |||||||| || |||||||| || | || |
Sbjct 82064 TTACCAGTACCAGGAGGACCAGAAAGAACAGCACCTCGAGGGATCTTGGCACCTAATTTC 82123
Query 16295 AAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGC 16354
|||| | |||| | ||||| ||| |||| ||| | ||| ||||| || |
Sbjct 82124 -TCGTATTTAGCAGGCTCTTTAAGGAAACTAACAAACTCCATGATTTCCTCTTTAGCCTC 82182
Query 16355 GTCAATCCCCTCAACATCGGTAAAC 16379
|||| || ||||||||| ||||
Sbjct 82183 GTCAGCGCCAGCAACATCGGAAAAC 82207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741111959520
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