Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq79 199 5e-46
seq155 120 4e-22
seq43 95.1 1e-14
seq78 93.3 5e-14
>seq79
Length=299291
Score = 199 bits (220), Expect = 5e-46
Identities = 1116/1757 (64%), Gaps = 61/1757 (3%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
|| || |||||||| || |||||||| || | || ||| | || | ||||||| |
Sbjct 119899 CGCAGGTAGTACATACCTGTCTTGAGACCCTTTTGCCATCCATAGAAATGCATACTGGTC 119840
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || ||| || || | | |||| | |||||| || ||||| |
Sbjct 119839 AACTTGCCCATAGTAGGAGCTTGGATATAGATGTTCAAAGATTGACTTTGATCAATATAT 119780
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGG 105769
| |||| | || ||||||||||||| ||| || ||||| || || |
Sbjct 119779 GCAGCACGGTCAGCAGCCATATCAATGATTGTCTTTTGAGAGAGCTCCCAAACAGTCTTG 119720
Query 105770 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCC---CCCGCC 105826
|| | | |||||| ||||| || || | | ||| |||||||| ||||| | ||
Sbjct 119719 TATAAAGCCTTGATGTCATCAGGAATGTTAGGGATGTTTTGAATAGAACCATTGCTAGCA 119660
Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCA-AAGACCAA-TCTTCTTGAGATCATTGA 105884
||| || | |||||| | | ||| || |||| || | ||||| || |
Sbjct 119659 ATGATTCTG---TTCTTCATGTTTTCACCCCACAATCCCAAGTCGACA--AGATCCTTCA 119605
Query 105885 CGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTC 105943
| | |||||||||| |||||||| || ||| ||| | ||| ||||||||
Sbjct 119604 ACAACCATTGGTTGACAATCTGGAACTCTCCAGCAAGGACTCTACG-AGAGTAGATGTTG 119546
Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003
| ||||| || ||||| |||||||| ||||| | |||||| | ||| || || || |||
Sbjct 119545 GATGTGTAAGGCTCAAAACATTCATTGTTACCGAGGATTTGGGAGGTCGAAGCAGTAGGC 119486
Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACC---CTTTTCCTTGATGCGTTCCTTGAGA 106060
|| || || | | |||| ||| | |||||| ||| || | | | ||| |||
Sbjct 119485 ATAGGAGCAACGAGAAGAGAGTTTCTAAGACCGTGCTTAGCCATCTTC---TTCTTAAGA 119429
Query 106061 ACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCC 106118
| |||| || ||| | || ||| | | |||||||| || |||| | | |
Sbjct 119428 GTAGCCCAATCCCATAGATCAG--TGGGAGTAACATCCCACATGTCGTATTGTAAAAGAC 119371
Query 106119 CTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCAC 106178
| | || | ||||| |||||| | ||||| |||| || | ||||| | ||||
Sbjct 119370 CCTTAGAAGCAGGAGATCCCTCATAGGTCTCGTAGGCGCCATATTTCTCAGCAAGTTCAA 119311
Query 106179 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 106238
| || | | || || || ||||||||| |||| || |||| | |||||
Sbjct 119310 TTGAAGATTCTACAGCAGCATGGTAAATGGTTTCAGAGATTTGAATGTTCAATTGCTTGG 119251
Query 106239 CTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 106298
||||| || || |||| | ||| || || |||| || | |||||||| |
Sbjct 119250 CTTCAGGAGAGTCGAATGGCAAACGGAGAGCCATGAAAGCATCAGCTAAACCTTGAATGC 119191
Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAA 106355
| | | ||||||||||||| || | ||| ||| | ||| ||| || ||||| |
Sbjct 119190 CAAGAGCAATAGGTCTGTGACGGAAGTTAC---TTCTCTCAGCCTCCTTTACTGGATAGA 119134
Query 106356 AATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTT 106415
| ||||||||||| | || | ||| | ||||| ||| | | ||| || || |
Sbjct 119133 AGTTTCTGTCAATAATGACATTCAAGTTTCTAGTAACGGCCTTGGCAACTTCGTGGAGCT 119074
Query 106416 TTTCATAAT-----CAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGAT 106467
| ||| | | || ||| | || ||| | ||| | ||||||| |
Sbjct 119073 TCTCAAAGTTGTACCATAAG--CCTTCATCATCACTTTCAACAAAAGCAGGAAGGGACAA 119016
Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527
|| ||||| || ||||||||| || || | | |||||| | |||||| ||
Sbjct 119015 AGAAGCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGACAATTTCACAGCA 118956
Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587
|||||||||| || || || |||| || | ||| |||||||| |||| || |||||
Sbjct 118955 CAAGTTGGAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGCTGTTACAAGCATC 118896
Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA- 106646
||||||||||||| |||| | || ||||| || || | || || || || | ||| |
Sbjct 118895 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGATAGCATACCAGAG 118836
Query 106647 CATCGGCGGCTGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGG 106705
| || | | || | | | | | | || | || || || |||||| ||||||
Sbjct 118835 CTTCTGAGCCTTG-ATAGT-TCTTCTACCTTTGCCTTCTTTTTCATACTTTTCATAGAGG 118778
Query 106706 GCTTCAAACTCCTCACC---CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 106762
|| |||| || || || ||| |||| | ||| || || | || || |
Sbjct 118777 GCAACAAATTCGTCTCCATAGACCTCGTC---CAAACCAGGACACTCATTAGGGCACATC 118721
Query 106763 AGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820
| || ||| | || | | ||| || | ||||||||| | ||| || ||||| ||||
Sbjct 118720 AAAGTCCAAT--CCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGATCCAAAGGG 118663
Query 106821 ATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879
| || | |||||| ||| || | ||||| | ||| ||||| ||| || || | |
Sbjct 118662 CCAAGAACAAATCTCTGGCACGGA-CTTCTTCCTTACCGTGGTTCTTTCGCAAGTCGATG 118604
Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCG 106935
|| || | | ||| ||||||| ||||| | || | |||| || || || | |
Sbjct 118603 AATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCACCTGGTCTCTTG 118544
Query 106936 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995
||| |||| | ||||| | || ||| ||| || || | | ||| || | |||
Sbjct 118543 -TTACCACCTTGGTCAACATATCTAGCAGTGTTGTTGAAAACTCTCAACATAGGGACAAT 118485
Query 106996 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 107055
||| | || ||| || || || |||| || | |||| | | || |||||
Sbjct 118484 ACCGTTAGAAGTACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGATATTGTGGAT 118425
Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 107115
|| |||||||| || || |||| ||||| ||||| | | | ||| ||||
Sbjct 118424 ACTCAAACCAATACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAAAGTATCATA 118365
Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175
|||||| | || ||||| ||||| || | | ||| ||| ||||| || || |
Sbjct 118364 GATACCCTCAATGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACATTTGTGGCTT 118305
Query 107176 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCT 107234
|| |||||||||||| | | || || | || ||| | || ||| ||| ||||| |
Sbjct 118304 GGGAGTACCAGCATTGTACAAAGTAGGAGAAGCATGAGT-AAAGTACTTTTGTGACATGT 118246
Query 107235 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCA 107294
| ||| || || | | | ||||||| | || ||||| || | || || | ||
Sbjct 118245 AATTGTAAGTTTCAATGGCCTTGGCAATGTCCGCGCCATGGATACCAACAGCTACTCTCA 118186
Query 107295 TAAACATGTATTGGGGT 107311
| | ||| | ||| |||
Sbjct 118185 TGATCATATGTTGAGGT 118169
>seq155
Length=566151
Score = 120 bits (132), Expect = 4e-22
Identities = 687/1081 (64%), Gaps = 51/1081 (5%)
Strand=Plus/Minus
Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640
|| || | ||| | ||| ||||| || ||||||||||| | ||||| |||| | ||||
Sbjct 483782 GCTTTTGTTCGTAAATAATACATTCCTGTCTTGAGTCCCTTCTTCCAGCCGTAGAAATGC 483723
Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700
||| || || ||| | || ||| ||| |||||||| ||||||||||||| ||||
Sbjct 483722 ATACTAGTAAGTTTGCCAGTAGTGGGATTTTTCATGAAAATATTCATACTTTGAGACTGG 483663
Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCAC 105760
|||||| | ||||| || | || |||||||| || | | ||| | | ||||||
Sbjct 483662 TCAATGTATCGACCGCGGTCGGCGGCCATATCGATTATCACTTTCTGGCTCAATTCCCAG 483603
Query 105761 ACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACC- 105819
| || || | | ||| | ||| |||| || || || ||||| || || ||
Sbjct 483602 GCCGTCTTATATATCTCCTTCAAATCGCCTGGAATCTCATTAATGTTTTGGATAGAGCCA 483543
Query 105820 CCCCGCCT--TGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGA 105877
| | || | | |||| | | | ||||| ||| | ||| | | |||
Sbjct 483542 TCTTGACTAATTATCATG---TGCCTGATATCAGCATTCCACAAACCTAATTGGGCTAGA 483486
Query 105878 TCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAG 105937
|| | || |||| | |||||||| || || || | ||| | || |||
Sbjct 483485 TCCCTTACAAGATATTCATTGACAATTTGGAATTCGCCAGAAAGGACCCGTCGAGTATAT 483426
Query 105938 ATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCT 105997
|| || | ||| |||||||| || || || ||| | ||||| | || || ||
Sbjct 483425 ATATTTGATGTGATTGGTTCAAAACACTCGTTGAAACCAAGAATTTGCGAAGTCGAAGCG 483366
Query 105998 GTTGGCATTGGTGC--CATCAAAAGACTGTTACGAAGACC---CT------TTTC---CT 106043
|| ||||||||||| || | ||||| || | ||| || || | || ||
Sbjct 483365 GTGGGCATTGGTGCGACAACTAAAGA--ATTCCTAAGTCCAAACTCGGAAATATCACGCT 483308
Query 106044 TGATGCGTTCCTTG----AGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCAC 106099
| | || ||| | | || |||| |||| |||| | | |||| |||||
Sbjct 483307 TTAAGCTCTCCCAGTCCCATAA-ATCC--GTCG-CCTTGAAATCAGGCTCAC---CCCAC 483255
Query 106100 ATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCT 106159
| ||| ||||| | || ||| | || | |||||||||| | | | || || | ||
Sbjct 483254 AAATCGAATTGCAACATCCCCTTCGAAGCGGGAGAACCCGAATAACTATCGTATGGTCCG 483195
Query 106160 TGGGCTTCAGCCA-ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGAT 106218
| ||| || | | || || | ||||| | | || ||||| || |||||||| ||
Sbjct 483194 TTTTCTTTGGCTAGCTCCATAGAT-GCCTCGACTGCCGCATGATATATAGTTTCAAATAT 483136
Query 106219 ACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT-GCGTA-GCGGCACAAAATAAAT 106276
| |||| | |||||||| || |||||| || || || | | |||| |
Sbjct 483135 TTGCACATTAAGTAATCTGGCTTCAGACGAGTCAAATGGCATACGCAGTTTCATATAAGT 483076
Query 106277 ACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC 106336
||| || | ||||| || || | | | || ||||||||| || ||||||| | | |
Sbjct 483075 --ATCTGCCAATCCTTGGACTCCGACAGCTATGGGTCTGTGTTTCACATTAGACCTCCTC 483018
Query 106337 GCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 106396
|||| || |||||||| ||| |||| |||| ||| |||||| | | || |
Sbjct 483017 GCAGATTCGACGGGATAGTCATTGATGTCTATGATCTTGTTCAGATTTCTAGCGACTACT 482958
Query 106397 TTTGTGATTTCATGAAGTTTTTCATAATCA----AAAGTGCGA----GT-CTCTTCATTG 106447
|| | | ||||||||| |||||| | ||| | | | | || ||| || | |
Sbjct 482957 TTGGCAACTTCATGAAGCTTTTCAAAGTCATACCATACCTCAACATCGTCCTCGTCGTAG 482898
Query 106448 ---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504
||| || |||| | || || || || | ||| |||||||| |||||||| |
Sbjct 482897 TGTACAAACGTTGGTAACGCTATAGAGGCGAGATTACAAACAGCGGTCTCATCAGGAGAC 482838
Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564
| || | || ||||| |||||||| || || ||||| || || | ||| || |||
Sbjct 482837 GAATATTGTACTATTTCGGTACACAAATTTGACGATTTAATTGTGCCAAGATTATTCTGG 482778
Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624
|| ||| |||||| ||||| || || ||||| | || | || ||||| |||||
Sbjct 482777 TTTGACTTCCGGTTGCATGCATCTTTATATAGCATAAATGGATTACCAGTCTCGATCTGT 482718
Query 106625 G 106625
|
Sbjct 482717 G 482717
>seq43
Length=391780
Score = 95.1 bits (104), Expect = 1e-14
Identities = 332/507 (65%), Gaps = 16/507 (3%)
Strand=Plus/Plus
Query 9191 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9250
||| || || | ||| || || | | ||| | ||||||||||||| | ||| || |
Sbjct 81706 ACGGTCGAATCTACCAGGTCGCAATAACGCCTTATCAAGGATATCAGGTCTATTAGTGCC 81765
Query 9251 GGCGATGACAACAATACCTGTT--TCATTATCAAAACCATCCATCTCTGTCAAAAGTTGG 9308
|| | || || | | || | ||| ||||||||||||| || | || |||
Sbjct 81766 TGCTAGCACGACGACA--TGATCATCAGAGGCAAAACCATCCATTTCAACGAGAATTTGA 81823
Query 9309 TTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATA----CCACCAGCACTGCGTTGC 9362
|||| ||| ||| | |||||| | | | | || | ||||| ||| || ||
Sbjct 81824 TTAAGAGTAGCTTCTCTTTCATCGTGACCACCGCCAAAAGAACCACCTTGACTACGA-GC 81882
Query 9363 T-TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421
| |||| | ||||||||||||||||| || ||||||| || | | || || |
Sbjct 81883 TCTTCCAATAGCATCAATCTCATCAATAAATACAATACTAGGAGCCTCCTTACGAGCTGT 81942
Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9481
|||| ||||| | |||| | || || |||||||||||||||||||| || | |
Sbjct 81943 AGCAAATAGATCTCTCACCCGGCTAGCACCAACACCAACAAACATCTCCACGAATTCCGA 82002
Query 9482 GGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540
| | || ||| || || || ||| | ||||| || ||||| || || | ||
Sbjct 82003 GCCAGATACA-GAGAAAAATGGTACACCTGCCTCACCAGCTGTGGCTTTAGCAAGTAAAG 82061
Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-ACTT 9599
||||||| ||||| || ||| | || | ||||| || || |||||||| || | ||
Sbjct 82062 TCTTACCAGTACCAGGAGGACCAGAAAGAACAGCACCTCGAGGGATCTTGGCACCTAATT 82121
Query 9600 CCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 9659
| |||| | |||| | || || ||| |||| ||| | ||| ||||| ||
Sbjct 82122 TC-TCGTATTTAGCAGGCTCTTTAAGGAAACTAACAAACTCCATGATTTCCTCTTTAGCC 82180
Query 9660 GCGTCAATCCCCTCAACATCGGTAAAC 9686
||||| || ||||||||| ||||
Sbjct 82181 TCGTCAGCGCCAGCAACATCGGAAAAC 82207
>seq78
Length=1347436
Score = 93.3 bits (102), Expect = 5e-14
Identities = 108/143 (76%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351
|| ||||| || ||||| | ||||| ||||| | || ||||| ||||| ||||||
Sbjct 284568 CCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGCATAAGACCACGCTTC 284627
Query 117352 TTCAACCAATAAATA-GCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410
||||||||| | ||| ||| ||||| || ||||||||||||||||| ||| || ||
Sbjct 284628 TTCAACCAAAAGATACTAGCA-AATGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAA 284686
Query 117411 CGCAAAAAGGCGCTCGGCGAAGG 117433
|||| || ||||| || ||||
Sbjct 284687 AGCAACGAGACGCTCAGCAAAGG 284709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979575789840
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