Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq32 104 3e-17 >seq32 Length=396137 Score = 104 bits (114), Expect = 3e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 154875 ATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATGTAA 154933 |||||||||||||||||||| | ||||| ||||| || | | || || || || Sbjct 32487 ATGATTACATACCCATCTACTTACGGTGTGTTTGAGCCTGGTGTGAAGAGAGCCATTGAA 32428 Query 154934 GATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGT 154993 || || || | |||||||| || || | ||||| || ||| | ||||| ||| | Sbjct 32427 -ATTGTCCACTCTCACGGTGGTCAAGTGTACATGGATGGTGCTAATATGAATGCCCAGAT 32369 Query 154994 AGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAAC 155053 || || | ||| |||| |||||| ||||| ||||| | ||||| ||||| || Sbjct 32368 CGGTCTTACCTCTCCAGGTGAAATTGGTGCTGATGTTTGTCACTTGAACTTGCATAAGAC 32309 Query 155054 ATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||||||||| ||||| ||||| || || || || || || || |||| Sbjct 32308 TTTCTGTATTCCTCATGGTGGTGGTGGCCCAGGAGTTGGCCCCATCTGTGT 32258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211598133440