Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq111 176 1e-38
seq32 172 1e-37
>seq111
Length=751517
Score = 176 bits (194), Expect = 1e-38
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||||||||| ||||| ||||| || ||||| || | ||| ||||| |||||||||
Sbjct 299238 ACAAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTGCCATCTTCG 299179
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| |||||||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| ||
Sbjct 299178 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCCTGG 299119
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || ||||||||||| ||| || || || ||||| | |||||
Sbjct 299118 ATCTTGGTCTTGACATTGTCAATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTA 299059
Query 195112 CCTGTCAAAGTTTTTACGAA 195131
|| || | || || |||||
Sbjct 299058 CCAGTAAGGGTCTTGACGAA 299039
>seq32
Length=396137
Score = 172 bits (190), Expect = 1e-37
Identities = 161/205 (79%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||| |||||||| || |||||||| | |||||| | || ||||| || ||
Sbjct 381686 GTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCCAGTTG 381745
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| ||||| || | || ||||||||||||||||| ||||| ||||||||||| ||
Sbjct 381746 CTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 381805
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || |||||||| ||| || || ||||| || | ||||| || ||
Sbjct 381806 GGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTACCAGT 381865
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
| || |||||||| | |||||||
Sbjct 381866 AAGGGTCTTTACGAAGATTTGCATT 381890
Score = 170 bits (188), Expect = 4e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||| ||||| |||||||| ||||| || | ||||||||| ||||| |||
Sbjct 381225 ACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCG 381284
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| |||||||| || |||||||||| |||||||||||| ||||| || || || || |||
Sbjct 381285 AGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCCTGA 381344
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || |||||||| ||| || ||||| || || | |||||
Sbjct 381345 ATCTTGGTCTTAACATTATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTCTTA 381404
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||| || ||||| | ||||||
Sbjct 381405 CCAGTGAGAGTCTTGACGAAGATTTGCAT 381433
Score = 170 bits (188), Expect = 4e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||| ||||| ||||| || ||||| || | ||||| | ||||| |||
Sbjct 381453 ACGAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCCTCG 381512
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || || ||||| |||| |||||||||||| ||||| || || ||||||||
Sbjct 381513 AGTTGCTTGCCAGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 381572
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || ||||| || || ||| ||| || |||||||||| |||||
Sbjct 381573 ATCTTGGTCTTGACATTGTCAATAGTATCAGAAGATTCGACCTCAAGGGTAATAGTCTTG 381632
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || ||||| | ||||||
Sbjct 381633 CCAGTCAAGGTCTTGACGAAGATTTGCAT 381661
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| || | || ||||| || ||||| | |||
Sbjct 380546 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCTTCCAACTG 380605
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| ||||||||||| |||||||||||||| |||||||| || |||||||| || ||
Sbjct 380606 CTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 380665
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || |||||||| ||| || || || ||||| | ||||| || ||
Sbjct 380666 GGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 380725
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| ||| || || || | ||||||
Sbjct 380726 CAGAGTCTTGACAAAGATTTGCAT 380749
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||||||||| ||||| || ||||| |||| ||| ||||| ||||| || || ||
Sbjct 380774 GTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCCTCAAGTTG 380833
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| ||||| || | || ||||||||||| |||||||| || |||||||| || ||
Sbjct 380834 CTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 380893
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| || |||||||| ||| || || |||||||| | ||||| || ||
Sbjct 380894 GGTCTTAACGTTGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTACCAGT 380953
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 380954 GAGGGTCTTGACGAAGATTTGCAT 380977
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||| |||||||| || |||||||| | |||||| | ||||| ||||| ||
Sbjct 381002 GTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCGAGTTG 381061
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| ||||| || | || ||||||||||| ||||| || || |||||||| || ||
Sbjct 381062 CTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTT 381121
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || |||||||| ||| ||| ||||| || || | ||||| || ||
Sbjct 381122 GGTCTTAACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTACCAGT 381181
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || ||||| | ||||||
Sbjct 381182 CAAGGTCTTGACGAAGATTTGCAT 381205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479240271322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |