Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq32 104 2e-17
>seq32
Length=396137
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| || ||||| ||||| ||||| || ||| ||| | || |||
Sbjct 380541 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCTTCC 380600
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| || || || || || || ||||| |||||| | || | |||||||||||
Sbjct 380601 AACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 380660
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | ||| | ||| || |||| ||| ||||| ||
Sbjct 380661 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTG 380720
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || |||||||| |||||||| ||||||
Sbjct 380721 CCGGTCAGAGTCTTGACAAAGATTTGCATA 380750
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || |||||||| ||||| ||||| ||| |||| || || || || || |||||
Sbjct 381243 TCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCGAGTTGCTTACCAGCAAAG 381302
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| |||| ||| |||||| | || | |||||||| || |||||| || || ||
Sbjct 381303 ATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGTCTTAAC--AT 381360
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
||||||| ||| | ||| || |||| || || || || || |||||||||||
Sbjct 381361 --TATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTCTTACCAGTGAGAGTCTT 381418
Query 34967 CACAAAGATCTGCATA 34982
|| ||||| ||||||
Sbjct 381419 GACGAAGATTTGCATA 381434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632943225648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |