Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq79 291 9e-74
seq155 271 9e-68
seq78 212 7e-50
>seq79
Length=299291
Score = 291 bits (322), Expect = 9e-74
Identities = 1181/1863 (63%), Gaps = 29/1863 (2%)
Strand=Plus/Minus
Query 46971 TCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATA 47030
|||| || || || || | ||| ||| | |||| || || || | || ||||||
Sbjct 119944 TCTTGATCAACGGTGAATTGAATAGGAGCAGAAGCTGCTTGAGTACGCAGGTAGTACATA 119885
Query 47031 CCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTA 47090
|| ||||| | ||| ||||||||||||||||||||| || || || | ||
Sbjct 119884 CCTGTCTTGAGACCCTTTTGCCATCCATAGAAATGCATACTGGTCAACTTGCCCATAGTA 119825
Query 47091 GGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCT 47150
|| || |||| || || | ||||||||| ||||||||| ||||| | | |||||
Sbjct 119824 GGAGCTTGGATATAGATGTTCAAAGATTGACTTTGATCAATATATGCAGCACGGTCAGCA 119765
Query 47151 GCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATG 47210
|||||||| | || | |||| | | |||||| || || || || | || |||
Sbjct 119764 GCCATATCAATGATTGTCTTTTGAGAGAGCTCCCAAACAGTCTTGTATAAAGCCTTGATG 119705
Query 47211 TCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgttttctataattttgtttttt 47267
|| || || | |||| | ||||||||||| || | | | || ||| |||| ||
Sbjct 119704 TCATCAGGAATGTTAGGGATGTTTTGAATAGAACCATTGCTAGCAATGATTCTGTTCTTC 119645
Query 47268 aattcatttgaccaaagttttcgt--tcagttaatgtttttaaAAGATGAG-GATTAACA 47324
| | ||| ||| | | | || | || | || || | | | || |||
Sbjct 119644 ATGT--TTTCACCCCACAATCCCAAGTC-GACAAGATCCTTCAACAACCATTGGTTGACA 119588
Query 47325 ATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATA 47384
|| || || ||||||| || |||||||| || || || ||| || || || | |
Sbjct 119587 ATCTGGAACTCTCCAGCAAGGACTCTACGAGAGTAGATGTTGGATGTGTAAGGCTCAAAA 119528
Query 47385 GATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAG 47444
||||||| || || | ||||| | || || || |||||||| | ||||| | |||
Sbjct 119527 CATTCATTGTTACCGAGGATTTGGGAGGTCGAAGCAGTAGGCATAGGAGCAACGAG-AAG 119469
Query 47445 CTA-TTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATC 47503
| ||||| | || | || |||| ||||||||| |||||
Sbjct 119468 AGAGTTTCTAAGACCGTGCTTAGCCATCTTCTTCTTAAGAGTAGCCCAATCCCATAGATC 119409
Query 47504 TGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATT 47563
| ||| ||||| ||| | || ||||| | || || ||| ||||| || |
Sbjct 119408 AGTGGGAGTAACATCCCACATGTCGTATTGTAAAAGACCCTTAGAAGCAGGAGATCCCTC 119349
Query 47564 ATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATA 47623
||| || | || | || ||| | ||| |||||| | ||| | ||| ||
Sbjct 119348 ATAGGTCTCGTAGGCGCCATATTTCTCAGCAAGTTCAATTGAAGATTCTACAGCAGCATG 119289
Query 47624 ATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTG-CTTCTGATGATTCAAAAGGAT 47682
|| || |||||| | |||| ||||| | ||| |||| |||| | || || || ||
Sbjct 119288 GTAAATGGTTTCAGAGATTTGAATGTTCA-ATTGCTTGGCTTCAGGAGAGTCGAATGGCA 119230
Query 47683 ANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAG 47742
| || | ||| || || ||||||| |||| | |||| ||||| |||
Sbjct 119229 AACGGAGAGCCATGAAAGCATCAGCTAAACCTTGAATGCCAAGAGCAATAGGTCTGTGAC 119170
Query 47743 TTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTA 47802
||| |||||| || || |||||| |||| | || ||||| ||| |
Sbjct 119169 GGAAGTTACTTCTCTCAGCCTCCTTTACTGGATAGAAGTTTCTGTCAATAATGACATTCA 119110
Query 47803 GANNNNNNNNNNNNNNNNNNACAATTTC--------TCTTAATTTATTAAAATCAAACTT 47854
||| ||| ||| || | || || | |||
Sbjct 119109 AGTTTCTAGTAACGGCCTTGGCAACTTCGTGGAGCTTCTCAAAGTTGTACCATAAGCCTT 119050
Query 47855 GTT----ATTTATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCT 47910
| | || |||||| | ||| | | ||| || | ||||| ||||| || |
Sbjct 119049 CATCATCACTTTCAACAAAAGCAGGAAGGGACAAAGAAGCCAAGTTACAAACAGCCACTT 118990
Query 47911 CATTTGGATTAGTATATTGTATTATTTCA--GCACATAGATTACCACATTTGATAGTACC 47968
| | ||| || || | | |||||| ||||| || || | |||||||||||||
Sbjct 118989 CTTCAGGAGAAGAGTACTCGACAATTTCACAGCACA-AG-TTGGAAGATTTGATAGTACC 118932
Query 47969 CAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCC 48028
|| ||||| |||||| | ||||||| || |||||||| ||||| || || | ||
Sbjct 118931 CAGGTTTTGTTGATTACTCTTGCTGTTACAAGCATCCTTGTAGAGCATGAAGGGGTTACC 118872
Query 48029 AGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCT 48088
||| || | || | |||| ||||| | ||| | || |||||| ||| |||
Sbjct 118871 AGTCTCAGTTTGGGCCTCAAGGATAGCATACCAGAGCTTCTGAGCCTTGATAGTTCTTCT 118812
Query 48089 AGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATT 48148
| |||| || | ||| || || ||| | ||||||| || ||||| || |
Sbjct 118811 ACCTTTGCCTTCTTTTTCATACTTTTCATAGAGGGCAACAAATTCGTCTCCATAGACCTC 118752
Query 48149 ATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCT 48208
|| || |||||||| |||||||| |||||||| | ||||||||| | | || |||||
Sbjct 118751 GTCCAAACCAGGACACTCATTAGGGCACATCAAAGTCCAATCCTCGTTAGCCTTGACTCT 118692
Query 48209 AGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTC 48268
|||| || | || || |||||||| || | || ||||| || | | | ||||||
Sbjct 118691 CTTCATGAACAAGTCGGGGATCCAAAGGGCCAAGAACAAATCTCTGGCACGGACTTCTTC 118632
Query 48269 ATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAA 48328
|| || ||| || | || | || || | | ||| | ||||| || || ||
Sbjct 118631 CTTACCGTGGTTCTTTCGCAAGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAA 118572
Query 48329 ATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATT 48388
|| || || | ||||||||| || ||||| ||||| || | |||||| ||||| ||
Sbjct 118571 GTACATGGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTT 118512
Query 48389 GTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATA 48448
||| ||||||| ||||| ||||||||||| || || |||| || || || | ||||||
Sbjct 118511 GTTGAAAACTCTCAACATAGGGACAATACCGTTAGAAGTACCGTTAGTACCGGCAATATA 118452
Query 48449 ACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATAT 48508
||| | || | ||||| || | ||| ||||||||||| || || ||
Sbjct 118451 GGAACCAGTGGCACGGATATTGTGGATACTCAAACCAATACCACCTGCAGACTTCGAGAT 118392
Query 48509 TAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAA 48568
| ||||| || | |||||||| || || || || ||||| |||| ||||
Sbjct 118391 CAAGGCACAGGTCTTCAAAGTATCATAGATACCCTCAATGGAGTCATCCTTCATGTTTAC 118332
Query 48569 TAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGC 48628
| |||||| |||||||| || | ||| || | ||| | || || ||||| ||
Sbjct 118331 CAAGAAACAAGACGACATTTGTGGCTTGGGAGTACCAGCATTGTACAAAGTAGGAGAAGC 118272
Query 48629 ATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCA 48688
|||| |||| | || | ||| | | || || |||||||| | | || |||
Sbjct 118271 ATGAGTAAAGTACTTTTGTGACATGTAATTGTAAGTTTCAATGGCCTTGGCAATGTCCGC 118212
Query 48689 TTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTT 48748
||| ||||| | || ||| | ||| | ||||| ||||||||| ||| |||||||
Sbjct 118211 GCCATGGATACCAACAGCTACTCTCATGATCATATGTTGAGGTCTCTCAGCAATTTTTCC 118152
Query 48749 ATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAA 48808
|| || || | | || ||| ||||||| || || ||||| || |||||||| || ||
Sbjct 118151 GTTGATCTTGAGCAAGTAAGATCTTTCCAAGGTCTTGAAACCGAAGTAGTTGTAAGAGAA 118092
Query 48809 GTC 48811
||
Sbjct 118091 ATC 118089
>seq155
Length=566151
Score = 271 bits (300), Expect = 9e-68
Identities = 591/875 (68%), Gaps = 16/875 (2%)
Strand=Plus/Minus
Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939
|||||||| || |||||||| ||||| ||||| ||| | |||||||| ||||||
Sbjct 482879 GCTATAGAGGCGAGATTACAAACAGCGGTCTCATCAGGAGACGAATATTGTACTATTTCG 482820
Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACAT 47999
| ||| | ||| |||| || || || | ||| | || || ||| |||
Sbjct 482819 GTACACAAATTTGACGATTTAATTGTGCCAAGATTATTCTGGTTTGACTTCCGGTTGCAT 482760
Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059
|| || || || |||||||| || | ||||| || ||||| | ||| | || | |
Sbjct 482759 GCATCTTTATATAGCATAAATGGATTACCAGTCTCGATCTGTGCTTCTAGTATCGCAAAC 482700
Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTT-ATTATCATGTTCGTATTTAGTATA 48118
|||| || | | ||||| || | | | ||| || | || ||| | | ||
Sbjct 482699 CAAAGCTTC-TGGGCTTTAACTTTGCGCAATTGTCGATTTTCCTTCTCATATCGATTGTA 482641
Query 48119 TAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGA-CAT--TCATTAGGACA 48175
|||| ||||||||||| ||||| |||| | || ||||| | | ||||||| | |
Sbjct 482640 TAACGCTTCAAATTCATCTCCATAAACATCTGCCAAGCCAGGTGCCTGGTCATTAGAAAA 482581
Query 48176 CATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAG 48235
| | ||| || |||| || | ||| | ||||||| | ||| || ||||| ||
Sbjct 482580 AAGACA---CCATTCTTCATTATCGTGGACTTTCTTCATAAACAAATCCGGGATCCAGAG 482524
Query 48236 AGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTT---AAGTTC 48292
||| ||||| ||| | || ||| || || || |||||| || ||| ||||
Sbjct 482523 AGCGTAAAATAGATCTCGAGCTCTCAGCTCCTCTTTGCCATGGTT--TTTCCGCAAGTCT 482466
Query 48293 AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCG 48352
||||| | | ||||||| ||||||| ||||||||||| || || | |||| || ||
Sbjct 482465 AAGAAT-TGGAATATATCACCATGCCAAGGTTCTAAATAAATAGCAAAAGCACCAGGCCG 482407
Query 48353 TTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGAC 48412
|| || || |||||||| | ||| | |||||||| || ||||||| ||||||||| ||
Sbjct 482406 CTTGTTTCCGCCTTGATCGACATACCGAGCAGTATTATTGTAAACTCGTAACATTGGCAC 482347
Query 48413 AATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTAC- 48471
||| || || || | |||||| |||| | |||||| ||||| | | | ||||||
Sbjct 482346 AATTCCGTTCGAAGTTCCATTGCTTCCAGCAATATACGTTCCAGTGGAACGAATATTATG 482287
Query 48472 TAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531
|| |||| || || ||||| || |||||||||| | ||||| || | |||||
Sbjct 482286 TACATGAAGG-CCAATTCCACCGGCAGTTTTAGATATCATCGCACAATCCTTCAAGGTAT 482228
Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCG 48591
| ||||| || || ||| ||||||| ||||| | || ||| ||| || | ||| |
Sbjct 482227 CGTAAATACCCTCGATAGAATCATCTCTCATAGCCACTAAAAAGCAAGACGATAGTTGAG 482168
Query 48592 GATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATA 48651
||| || || ||||||||||| ||||| || |||||| | || |||| || || |
Sbjct 482167 GATTGGGTGTACCAGAATTAAATAAAGTTGGTGAAGCATGAGTGAAGTATTTTTCAGACA 482108
Query 48652 ACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACAC 48711
|||| ||||||||| || || ||||| | || ||||| | || || |
Sbjct 482107 TCAATCGATATGTTTCTATCACCTTTGGAATATCATTTCCGTGGATACCCACAGCCACTC 482048
Query 48712 GCATTAACATATATTGAGGTCTTTCAACAATTTTG 48746
||||||||| | ||| || || || || ||| ||
Sbjct 482047 TCATTAACATCTGTTGGGGCCTCTCGACGATTCTG 482013
>seq78
Length=1347436
Score = 212 bits (234), Expect = 7e-50
Identities = 601/916 (66%), Gaps = 17/916 (2%)
Strand=Plus/Plus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
|||||| || || | ||||| || || ||||||||||| || || | || ||
Sbjct 284255 TTTTTGGTAGTCAGAGACTCTCTTCTCGAAGAAATTAGTCTTACCAGAGAGAGAGATGTT 284314
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
||||| ||||| || ||||| | |||| || | || ||| ||| | | |
Sbjct 284315 CTCCATGAAATCGAAGGGATTAGTAGCATTGTAGACCTTGTTGTTTCCAAGGGAAAGCAA 284374
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
|| ||| || || ||||| | ||| ||| ||| | | | ||||||||| | |
Sbjct 284375 TAATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAGAAG 284434
Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
|| || | ||||| || | ||||| | ||| ||| || || || | |||||
Sbjct 284435 ACTACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAATAAT 284494
Query 18909 AGATACAACTCTAT-CTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967
| |||| | |||| ||||| || | ||| || ||| | |||||| || |
Sbjct 284495 CTTTTCAACAACAGACTTC-TTAGGTCTGTTGACAAGGTGGCCAAAAAGCAAACAAGCGA 284553
Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027
||||| || | || || || | | ||||| |||||||| || || ||||||||||
Sbjct 284554 AATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGCA 284613
Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087
| || || | || || ||||| || ||| ||||||||| ||||| ||||| ||||| |
Sbjct 284614 TAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACCCT 284673
Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147
| || || || |||||||| || | || || | ||| | || || | |||||
Sbjct 284674 CGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGATTGATCATCAGAGATCCAAG 284733
Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207
| || ||||| ||||||||||| || | ||| || || | || |||| || || |
Sbjct 284734 TTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCATGGAACAAGA 284793
Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
| || ||| | | ||| || | ||| | ||| || | ||| ||| | || | ||
Sbjct 284794 AGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAAGTCTCAGCAT 284853
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
| ||||| || || || || |||||||| ||||| | || || | ||||| || |
Sbjct 284854 GGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAATCTGGACCT 284913
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
||| | | ||||| || || | || ||||| || || ||||| || ||||| || |
Sbjct 284914 CACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAGCAAAGAAAG 284973
Query 19388 CTAATACATGTTTAATAAAATGTTTTTCATC-TGAGGTTAA---TGTATT-CCAATCATT 19442
| | ||| | ||||| | | ||||| | | |||| || || ||| ||| |
Sbjct 284974 CGAGCACACGAGAGATAAAGAATCTCTCATCATCA--TTAAGACGGTGTTCCCAGTCACT 285031
Query 19443 AATATCTTT----AGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498
|||||| || |||| |||| |||||| | ||||| ||||| ||||| |||| |
Sbjct 285032 AATATCCTTTCCAAGATCAATC----TCTTCAGCAGTCCAGAAAGAGGCCTCAGCTTGCT 285087
Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTT 19558
| ||||| | ||| || ||| | || | ||||| || | |||||||| || || |
Sbjct 285088 TGTACATTTGCCAGATCTCATGGTACTTGATAGGGAACAAGACAAATCTGTTAGGGTTCT 285147
Query 19559 CTTTAAGAATAGGTTC 19574
| | ||| | ||||||
Sbjct 285148 CCTGAAGGAGAGGTTC 285163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107633624240
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