Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq78 149 7e-31 >seq78 Length=1347436 Score = 149 bits (164), Expect = 7e-31 Identities = 351/528 (66%), Gaps = 3/528 (1%) Strand=Plus/Plus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 ||||| || |||||| || | |||||||| | | ||||| |||||||| || || Sbjct 284544 AAACAAGCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTC 284603 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 || || ||||| | ||| | || || | |||||| || ||||| || ||||| ||| Sbjct 284604 AAACCAGGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAG 284663 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352 || ||||| || || || || || || || ||||| | | || || || || |||| Sbjct 284664 AAGATACCCTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGATTGATCATCA 284723 Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412 || ||||| || | ||| || ||||| |||| ||| ||| | ||||| || Sbjct 284724 GAGATCCAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCA 284783 Query 37413 TTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATAC 37472 | || | ||||| || | | ||| | |||||||||||||| ||||| || Sbjct 284784 TGGAACAAGAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAA 284843 Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532 | |||| || ||||| || || || || || || || |||||| | || |||| Sbjct 284844 GTCTCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGA 284903 Query 37533 AATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 | || || || | | || |||| | | | ||| ||||| || || ||||| || Sbjct 284904 ATCTGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCA 284963 Query 37593 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA-ATTTTTTC 37649 ||||||||||| || ||| ||||| ||| ||||||| || | | | || | Sbjct 284964 GCAAAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAGACGGTGTTCC 285023 Query 37650 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 || ||| ||||||| ||| | ||||| || ||| | ||||| ||| Sbjct 285024 CAGTCACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAA 285071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592315570942640