Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq78 149 7e-31
>seq78
Length=1347436
Score = 149 bits (164), Expect = 7e-31
Identities = 351/528 (66%), Gaps = 3/528 (1%)
Strand=Plus/Plus
Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232
||||| || |||||| || | |||||||| | | ||||| |||||||| || ||
Sbjct 284544 AAACAAGCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTC 284603
Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292
|| || ||||| | ||| | || || | |||||| || ||||| || ||||| |||
Sbjct 284604 AAACCAGGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAG 284663
Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352
|| ||||| || || || || || || || ||||| | | || || || || ||||
Sbjct 284664 AAGATACCCTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGATTGATCATCA 284723
Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412
|| ||||| || | ||| || ||||| |||| ||| ||| | ||||| ||
Sbjct 284724 GAGATCCAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCA 284783
Query 37413 TTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATAC 37472
| || | ||||| || | | ||| | |||||||||||||| ||||| ||
Sbjct 284784 TGGAACAAGAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAA 284843
Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532
| |||| || ||||| || || || || || || || |||||| | || ||||
Sbjct 284844 GTCTCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGA 284903
Query 37533 AATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592
| || || || | | || |||| | | | ||| ||||| || || ||||| ||
Sbjct 284904 ATCTGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCA 284963
Query 37593 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA-ATTTTTTC 37649
||||||||||| || ||| ||||| ||| ||||||| || | | | || |
Sbjct 284964 GCAAAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAGACGGTGTTCC 285023
Query 37650 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697
|| ||| ||||||| ||| | ||||| || ||| | ||||| |||
Sbjct 285024 CAGTCACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAA 285071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592315570942640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |