Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq78 145 1e-29
>seq78
Length=1347436
Score = 145 bits (160), Expect = 1e-29
Identities = 476/730 (65%), Gaps = 11/730 (2%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| ||||| ||||| ||||| || ||||| || | ||||||||||||
Sbjct 284259 TGGTAGTCAGAGACTCTCTTCTCGAAGAAATTAGTCTTACCAGAGAGAGAGATGTTCTCC 284318
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTT--CCAGCA 47957
||||| |||||| || | | || || ||| ||| ||| | | | |
Sbjct 284319 ATGAAATCGAAGGGATTAGTAGCATTGTAGACCT-TGTTGTTTCCAAGGGAAAGCAATAA 284377
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| || ||||| |||| ||||||| ||||||| | ||||| || | ||
Sbjct 284378 TCTG-TCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAGAAGAC 284436
Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| || ||| || | || | || ||||| || || || ||||| | ||||
Sbjct 284437 TACATGG-CAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAATAATC 284495
Query 48077 TGCTTAACGCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
| | ||| |||| || ||| | ||||| ||||| | || | |||| || ||
Sbjct 284496 TTTTCAACAACAGACTTCTTAGG-TCTGTTGACAAGGTG---GCCAAAAAGCAAACAAGC 284551
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
|| || |||||| |||||| || || || | | | || ||||| | ||||||
Sbjct 284552 GAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGG 284611
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||| | || | || || | ||| || || || || || |||||||||||||| ||
Sbjct 284612 CATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACC 284671
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315
||| || || ||||| || ||| | ||| | || | || | | || ||||||||
Sbjct 284672 CTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGATTGATCATCAGAGATCCA 284731
Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375
| || |||||||| ||||||||||| || || || || | || || || |||| |
Sbjct 284732 AGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCATGGAACAA 284791
Query 48376 CTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGA 48435
|| ||| || ||| | ||| ||| | || | ||| ||||||
Sbjct 284792 GAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAAGTCTCAGC 284851
Query 48436 GTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCAC 48495
|| | |||||| || ||| ||||| |||||||| | |||||||| | ||| ||
Sbjct 284852 ATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAATCTGGAC 284911
Query 48496 TTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAA 48555
|| ||||||||||| | || ||||||||||| || ||||| || |||||||||||
Sbjct 284912 CTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAGCAAAGAA 284971
Query 48556 GGCAAGGACA 48565
|| || |||
Sbjct 284972 AGCGAGCACA 284981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530867069440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |