Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq78 145 1e-29 >seq78 Length=1347436 Score = 145 bits (160), Expect = 1e-29 Identities = 476/730 (65%), Gaps = 11/730 (2%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| ||||| ||||| ||||| || ||||| || | |||||||||||| Sbjct 284259 TGGTAGTCAGAGACTCTCTTCTCGAAGAAATTAGTCTTACCAGAGAGAGAGATGTTCTCC 284318 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTT--CCAGCA 47957 ||||| |||||| || | | || || ||| ||| ||| | | | | Sbjct 284319 ATGAAATCGAAGGGATTAGTAGCATTGTAGACCT-TGTTGTTTCCAAGGGAAAGCAATAA 284377 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || || ||||| |||| ||||||| ||||||| | ||||| || | || Sbjct 284378 TCTG-TCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAGAAGAC 284436 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| || ||| || | || | || ||||| || || || ||||| | |||| Sbjct 284437 TACATGG-CAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAATAATC 284495 Query 48077 TGCTTAACGCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 | | ||| |||| || ||| | ||||| ||||| | || | |||| || || Sbjct 284496 TTTTCAACAACAGACTTCTTAGG-TCTGTTGACAAGGTG---GCCAAAAAGCAAACAAGC 284551 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 || || |||||| |||||| || || || | | | || ||||| | |||||| Sbjct 284552 GAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGG 284611 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || | || || | ||| || || || || || |||||||||||||| || Sbjct 284612 CATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACC 284671 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 ||| || || ||||| || ||| | ||| | || | || | | || |||||||| Sbjct 284672 CTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGATTGATCATCAGAGATCCA 284731 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 | || |||||||| ||||||||||| || || || || | || || || |||| | Sbjct 284732 AGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCATGGAACAA 284791 Query 48376 CTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGA 48435 || ||| || ||| | ||| ||| | || | ||| |||||| Sbjct 284792 GAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAAGTCTCAGC 284851 Query 48436 GTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCAC 48495 || | |||||| || ||| ||||| |||||||| | |||||||| | ||| || Sbjct 284852 ATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAATCTGGAC 284911 Query 48496 TTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAA 48555 || ||||||||||| | || ||||||||||| || ||||| || ||||||||||| Sbjct 284912 CTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAGCAAAGAA 284971 Query 48556 GGCAAGGACA 48565 || || ||| Sbjct 284972 AGCGAGCACA 284981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530867069440