Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq155 192 3e-44 >seq155 Length=566151 Score = 192 bits (212), Expect = 3e-44 Identities = 309/444 (70%), Gaps = 0/444 (0%) Strand=Plus/Minus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 ||||||| |||||| ||||| || ||||| | || ||||||| ||||| ||||||| Sbjct 482555 ACTTTCTTCATAAACAAATCCGGGATCCAGAGAGCGTAAAATAGATCTCGAGCTCTCAGC 482496 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044 || ||||| || || || || | |||||||| | || ||||| ||||| ||| Sbjct 482495 TCCTCTTTGCCATGGTTTTTCCGCAAGTCTAAGAATTGGAATATATCACCATGCCAAGGT 482436 Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104 |||||||| ||||||||| ||| | || ||| |||||||| || || | ||| Sbjct 482435 TCTAAATAAATAGCAAAAGCACCAGGCCGCTTGTTTCCGCCTTGATCGACATACCGAGCA 482376 Query 26105 GTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA 26164 || | |||| ||||| |||||||| || | ||| | ||| ||| || | | | | Sbjct 482375 GTATTATTGTAAACTCGTAACATTGGCACAATTCCGTTCGAAGTTCCATTGCTTCCAGCA 482316 Query 26165 ATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTT 26224 || | | ||| || || | ||||| || |||||| || |||||||| || ||| Sbjct 482315 ATATACGTTCCAGTGGAACGAATATTATGTACATGAAGGCCAATTCCACCGGCAGTTTTA 482256 Query 26225 GAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATT 26284 || || |||||||| | |||||| |||| || | || |||| || |||| Sbjct 482255 GATATCATCGCACAATCCTTCAAGGTATCGTAAATACCCTCGATAGAATCATCTCTCATA 482196 Query 26285 CCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGT 26344 | | |||||| ||||| |||| ||| | || | ||| || ||||||||||| || ||| Sbjct 482195 GCCACTAAAAAGCAAGACGATAGTTGAGGATTGGGTGTACCAGAATTAAATAAAGTTGGT 482136 Query 26345 GTAGCATGAGTATAATATCCTTCA 26368 | ||||||||| | ||| |||| Sbjct 482135 GAAGCATGAGTGAAGTATTTTTCA 482112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039488068450