Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq32 104 3e-17 >seq32 Length=396137 Score = 104 bits (114), Expect = 3e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||| || || || || || || || ||||| ||||| ||||||||||| |||||||| Sbjct 32258 ACACAGATGGGGCCAACTCCTGGGCCACCACCACCATGAGGAATACAGAAAGTCTTATGC 32317 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || | ||||| ||||| |||||| |||| ||| | ||||| | ||| ||| Sbjct 32318 AAGTTCAAGTGACAAACATCAGCACCAATTTCACCTGGAGAGGTAAGACCGATCTGGGCA 32377 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| |||||||| | || || |||||||| | || || || || || | Sbjct 32378 TTCATATTAGCACCATCCATGTACACTTGACCACCGTGAGAGTGGACAAT-TTCAATGGC 32436 Query 138363 TGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412 | || | | | ||||| ||||| | ||| ||||| ||||||||||| Sbjct 32437 TCTCTTCACACCAGGCTCAAACACACCGTAAGTAGATGGGTATGTAATCAT 32487 Score = 95.1 bits (104), Expect = 1e-14 Identities = 179/260 (69%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || || | ||||||||| | || || | | | |||||| ||||| || ||||| || Sbjct 33356 CCTTCAGGACCATGATAAACAGCGTACATGGCGGCCATATTGGCGAGTAGAGCTTGGGCA 33415 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || ||||| || || || || || | | ||||||||| || | |||||| || || Sbjct 33416 GTACAGATATTGGAAGTAGCCTTTTCACGACGAATATGCTGTTCACGAGTTTGAAGAGCC 33475 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCC--ACTGACTGACCTACAATTCTGCCAGGTA 139440 |||||| | ||||||||||| | |||| ||| || | || | || | || || | Sbjct 33476 AATCTGAAAGCAGGATTGCCAAGACGGTCCTTACT-AC-GGCCAATAAGACGACCGGGCA 33533 Query 139441 TCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCA 139500 |||||||||| | || | || ||||| |||||||| ||||| || ||||| | Sbjct 33534 TCTTTCTCTTCTCAGAATCAGCAACAGCGAAGAAGGCAGCATGTGGACCACCATATCCGA 33593 Query 139501 TAGGAATACCAAACCTTTGC 139520 |||| ||||| || ||| Sbjct 33594 ATGGAACGCCAAATCTCTGC 33613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997198578320