Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq32 104 3e-17
>seq32
Length=396137
Score = 104 bits (114), Expect = 3e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||| || || || || || || || ||||| ||||| ||||||||||| ||||||||
Sbjct 32258 ACACAGATGGGGCCAACTCCTGGGCCACCACCACCATGAGGAATACAGAAAGTCTTATGC 32317
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
|| || | ||||| ||||| |||||| |||| ||| | ||||| | ||| |||
Sbjct 32318 AAGTTCAAGTGACAAACATCAGCACCAATTTCACCTGGAGAGGTAAGACCGATCTGGGCA 32377
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | ||| |||||||| | || || |||||||| | || || || || || |
Sbjct 32378 TTCATATTAGCACCATCCATGTACACTTGACCACCGTGAGAGTGGACAAT-TTCAATGGC 32436
Query 138363 TGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412
| || | | | ||||| ||||| | ||| ||||| |||||||||||
Sbjct 32437 TCTCTTCACACCAGGCTCAAACACACCGTAAGTAGATGGGTATGTAATCAT 32487
Score = 95.1 bits (104), Expect = 1e-14
Identities = 179/260 (69%), Gaps = 4/260 (2%)
Strand=Plus/Plus
Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322
|| || | ||||||||| | || || | | | |||||| ||||| || ||||| ||
Sbjct 33356 CCTTCAGGACCATGATAAACAGCGTACATGGCGGCCATATTGGCGAGTAGAGCTTGGGCA 33415
Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382
|| ||||| || || || || || | | ||||||||| || | |||||| || ||
Sbjct 33416 GTACAGATATTGGAAGTAGCCTTTTCACGACGAATATGCTGTTCACGAGTTTGAAGAGCC 33475
Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCC--ACTGACTGACCTACAATTCTGCCAGGTA 139440
|||||| | ||||||||||| | |||| ||| || | || | || | || || |
Sbjct 33476 AATCTGAAAGCAGGATTGCCAAGACGGTCCTTACT-AC-GGCCAATAAGACGACCGGGCA 33533
Query 139441 TCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCA 139500
|||||||||| | || | || ||||| |||||||| ||||| || ||||| |
Sbjct 33534 TCTTTCTCTTCTCAGAATCAGCAACAGCGAAGAAGGCAGCATGTGGACCACCATATCCGA 33593
Query 139501 TAGGAATACCAAACCTTTGC 139520
|||| ||||| || |||
Sbjct 33594 ATGGAACGCCAAATCTCTGC 33613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578997198578320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |