Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq79 219 5e-52 seq155 141 1e-28 seq43 102 1e-16 seq78 93.3 5e-14 >seq79 Length=299291 Score = 219 bits (242), Expect = 5e-52 Identities = 1116/1749 (64%), Gaps = 65/1749 (4%) Strand=Plus/Plus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||| ||||| | || || | || ||||| || | ||||||| | | | || || Sbjct 118179 ATGATCATGAGAGTAGCTGTTGGTATCCATGGCGCGGACATTGCCAAGGCCATTGAAACT 118238 Query 75281 TACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339 ||| | | ||||| ||| ||| || | ||| || | || || | | ||||||||| Sbjct 118239 TACAATTACATGTCACAAAAGTACTTT-ACTCATGCTTCTCCTACTTTGTACAATGCTGG 118297 Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399 ||| || | || || ||||| ||| ||| | | || ||||| ||||| || | Sbjct 118298 TACTCCCAAGCCACAAATGTCGTCTTGTTTCTTGGTAAACATGAAGGATGACTCCATTGA 118357 Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459 |||||||||| ||| | | | ||||| ||||| |||| || || |||||||| Sbjct 118358 GGGTATCTATGATACTTTGAAGACCTGTGCCTTGATCTCGAAGTCTGCAGGTGGTATTGG 118417 Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATC 75519 || ||||| || | | |||| | || |||| || || || ||| || Sbjct 118418 TTTGAGTATCCACAATATCCGTGCCACTGGTTCCTATATTGCCGGTACTAACGGTACTTC 118477 Query 75520 AGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGC 75579 | |||||| | || ||| | | || || ||| ||| || | ||||| | |||| Sbjct 118478 TAACGGTATTGTCCCTATGTTGAGAGTTTTCAACAACACTGCTAGATATGTTGACCAAGG 118537 Query 75580 GGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAACCATGGCATGCCGATAT 75633 || | |||| | || | | ||| | |||||||| || ||||| | |||| | Sbjct 118538 TGG---TAACAAGAGACCAGGTGCTTTCGCCATGTACTTGGAGCCTTGGCACGACGATGT 118594 Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT-AGAGATC 75692 | || ||| | || || ||| ||||| ||| | ||||| | || ||| |||||| Sbjct 118595 TTTTGAATTCATCGACTTGCGAAAGAACCACGGTAAGGAAGAAG-TCCGTGCCAGAGATT 118653 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG--AGGGTGGTCA 75750 | || | |||| ||||| || ||| | ||||||||| | || ||| | | || | Sbjct 118654 TGTTCTTGGCCCTTTGGATCCCCGACTTGTTCATGAAGAGAGTCAAGGCTAACGAGG--A 118711 Query 75751 ATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG---GGTGAGGA 75807 ||| || | | || || | || || ||| | |||| ||| || || || Sbjct 118712 TTGGACTTTGATGTGCCCTAATGAGTGTCCTGGTTTG---GACGAGGTCTATGGAGACGA 118768 Query 75808 GTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGC 75867 |||| |||||||| |||||||||| | || || | || | ||| | | || Sbjct 118769 ATTTGTTGCCCTCTATGAAAAGTATGAAAAAGAAGGCAAAGGTAGAAGAACTAT-CAAGG 118827 Query 75868 CGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGC 75926 | | || | | ||| | ||||| || | | || || |||||||| | || | |||| Sbjct 118828 CTCAGAAGCTCTGGTATGCTATCCTTGAGGCCCAAACTGAGACTGGTAACCCCTTCATGC 118887 Query 75927 TTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCT 75986 | ||||||||||||||||||| |||||||| ||| | || |||| || ||||| | Sbjct 118888 TCTACAAGGATGCTTGTAACAGCAAGAGTAATCAACAAAACCTGGGTACTATCAAATCTT 118947 Query 75987 CAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATT 76046 | || | ||| |||||| | |||||| | | || || ||||||||| || | Sbjct 118948 CCAACTTGTGCTGTGAAATTGTCGAGTACTCTTCTCCTGAAGAAGTGGCTGTTTGTAACT 119007 Query 76047 TGGCATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTG-----A 76098 |||| || | ||||||| | ||| | ||| || | ||| || | Sbjct 119008 TGGCTTCTTTGTCCCTTCCTGCTTTTGTTGAAAGTGATGATGAAGG--CTTATGGTACAA 119065 Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158 | ||| || || || ||| | | ||| ||||| | ||| | || | ||||| Sbjct 119066 CTTTGAGAAGCTCCACGAAGTTGCCAAGGCCGTTACTAGAAACTTGAATGTCATTATTGA 119125 Query 76159 CAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTAT 76215 |||||| || ||||| || ||| ||| | ||| ||| | || ||||||||||| Sbjct 119126 CAGAAACTTCTATCCAGTAAAGGAGGCTGAGAGAA---GTAACTTCCGTCACAGACCTAT 119182 Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTC 76275 || | | || |||||||| | || |||| || || ||| | |||| || || Sbjct 119183 TGCTCTTGGCATTCAAGGTTTAGCTGATGCTTTCATGGCTCTCCGTTTGCCATTCGACTC 119242 Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335 |||||||||| | |||| || |||| ||||||||| || || || | | || Sbjct 119243 TCCTGAAGCCAAGCAATTGAACATTCAAATCTCTGAAACCATTTACCATGCTGCTGTAGA 119302 Query 76336 GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGC 76395 | |||| | ||||| | || |||| ||||| | |||||| ||||| || Sbjct 119303 ATCTTCAATTGAACTTGCTGAGAAATATGGCGCCTACGAGACCTATGAGGGATCTCCTGC 119362 Query 76396 GTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA--CGAC 76453 || | || | | || | || |||||||| | | ||| || | ||| || Sbjct 119363 TTCTAAGGGTCTTTTACAATACGACATGTGGGATGTTACTCCCA--CTGATCTATGGGAT 119420 Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513 |||| | ||| ||| | || || | |||||| | ||| |||| | | || Sbjct 119421 TGGGCTACTCTTAAGAAGAAGATGGCTAAGCACGGTCTTAGAAACTCTCTTCTCGTTGCT 119480 Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573 || ||||| || || || ||| | |||||| | ||||| |||||||| ||||| || ||| Sbjct 119481 CCTATGCCTACTGCTTCGACCTCCCAAATCCTCGGTAACAATGAATGTTTTGAGCCTTAC 119540 Query 76574 ACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCAC 76633 ||| | ||||||||| | ||| ||| || || ||||| ||||||||| | Sbjct 119541 ACATCCAACATCTACTCTCGTAGAGTCCTTGCTGGAGAGTTCCAGATTGTCAACCAATGG 119600 Query 76634 CTCGTCAATGACCTCAAGAAGA-TTGG---TCTCTGGTCCAAGGATATGAAGGA---TCT 76686 | | || || || | || |||| | | ||| || | |||||| | | Sbjct 119601 TTGTTGAAGGA--TCTTGTCGACTTGGGATTGTGGGGTGAAA--ACATGAAGAACAGAAT 119656 Query 76687 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAA 76746 ||| || ||| |||||| |||||||| ||| | | || || ||||| |||||| Sbjct 119657 CAT--TGCTAGC-AATGGTTCTATTCAAAACATCCCTAACATTCCTGATGACATCAAGGC 119713 Query 76747 TCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGA-TGTCATTGACATGGCCGCAGATC 76805 | | ||| || || ||||| || ||||| ||||||| ||||| || || | Sbjct 119714 TTTATACAAGACTGTTTGGGAGCTC-TCTCAAAAGACAATCATTGATATGGCTGCTGACC 119772 Query 76806 GTGGTCGCTTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAAAGTCCAACGAT 76863 ||| | | ||||||||||||||| | ||| |||||| || || ||| || || Sbjct 119773 GTGCTGCATATATTGATCAAAGTCAATCTTTGAACATCTAT--ATCCAAGCTCCTACTAT 119830 Query 76864 GTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTA 76923 | |||| | | ||||||| | || | ||| || |||| ||||| || || ||||| Sbjct 119831 GGGCAAGTTGACCAGTATGCATTTCTATGGATGGCAAAAGGGTCTCAAGACAGGTATGTA 119890 Query 76924 CTATCTCCG 76932 ||| || || Sbjct 119891 CTACCTGCG 119899 >seq155 Length=566151 Score = 141 bits (156), Expect = 1e-28 Identities = 863/1367 (63%), Gaps = 43/1367 (3%) Strand=Plus/Plus Query 75608 TACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGT 75667 || || ||||| ||||||| ||||| | | ||| | || || || ||||| || Sbjct 482428 TATTTAGAACCTTGGCATGGTGATATATTCCAATTCTTAGACTTGCGGAAAAACCATGGC 482487 Query 75668 GACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCAT 75726 | || ||| || | | | ||||||| |||| | || ||||| || || | || || Sbjct 482488 AAAGAGGAG-CTGAGAGCTCGAGATCTATTTTACGCTCTCTGGATCCCGGATTTGTTTAT 482546 Query 75727 GAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCT 75786 |||| || | || || |||||| |||||| | | ||| ||||||| || | Sbjct 482547 GAAGAAAGTCCACGATAATGAAGAATGGTGTCTTTTTTCTAATGACCAGGCACCTGGCTT 482606 Query 75787 CTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG 75846 | || | || || || |||||||| | |||| ||||| |||| | | Sbjct 482607 GGCAGATGTTTATGGAGATGAATTTGAAGCGTTATACAATCGATATGAGAAGGAAAATCG 482666 Query 75847 AGCCAATGCG-ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACG 75904 | | | |||| | || |||| | || | ||||| || || || || |||||| Sbjct 482667 A-CAATTGCGCAAAGTTAAAGCC-CAGAAGCTTTGGTTTGCGATACTAGAAGCACAGATC 482724 Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964 |||||||| | |||| |||||| || || ||||| || ||| |||| ||||| || Sbjct 482725 GAGACTGGTAATCCATTTATGCTATATAAAGATGCATGCAACCGGAAGTCAAACCAGAAT 482784 Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024 ||| | || ||||| || |||||| | || || ||||| || | || | | Sbjct 482785 AATCTTGGCACAATTAAATCGTCAAATTTGTGTACCGAAATAGTACAATATTCGTCTCCT 482844 Query 76025 GATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT---CAATGAA 76081 |||||||| |||||||| ||| | || || || || | |||| || ||| | | || Sbjct 482845 GATGAGACCGCTGTTTGTAATCTCGCCTCTATAGCGTTACCAACGTTTGTACACTACGAC 482904 Query 76082 GAG-AC----TCGCACTTT----TGATTATGAAAAACTTCATGAAATCACAAAGATTGTT 76132 ||| || | | | | ||| | |||||| ||||||||| | | || | || Sbjct 482905 GAGGACGATGTTGAGGTATGGTATGACTTTGAAAAGCTTCATGAAGTTGCCAAAGTAGTC 482964 Query 76133 ACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG 76192 | | |||||| ||| |||| |||| ||| |||||||| || ||||| | | | Sbjct 482965 GCTAGAAATCTGAACAAGATCATAGACATCAATGACTATCCCGTCGAATCTGCGAGGAGG 483024 Query 76193 TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT 76252 |||||| || ||||||||| || | | | || || ||||| | || ||| | |||| Sbjct 483025 TCTAATGTGAAACACAGACCCATAGCTGTCGGAGTCCAAGGATTGGCAGAT--ACTTATA 483082 Query 76253 TTGTGCCGC-TACGC-ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTG 76310 | | || || || |||||| || |||||||| | |||| | || |||| Sbjct 483083 TGAAACTGCGTATGCCATTTGACTCGTCTGAAGCCAGATTACTTAATGTGCAAATATTTG 483142 Query 76311 AAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCT 76370 |||| || ||||| || | | ||||| | || | || ||| | || | | Sbjct 483143 AAACTATATATCATGCGGCAGTCGAGGCATCTATGGAGCTAGCCAAAGAAAACGGACCAT 483202 Query 76371 ATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAG 76430 | || | | | |||||||||||| || | ||| || | || || ||| |||||| Sbjct 483203 ACGATAGTTATTCGGGTTCTCCCGCTTCGAAGGGGATGTTGCAATTCGATTTGTGGG--- 483259 Query 76431 GTGAAACCAAGCTCAA--CTACG----------ACTGGGATGTTCTCAAGGAACGC-ATC 76477 |||| | | |||| | ||| ||||||| | || || | | || Sbjct 483260 GTGAGCCTGATTTCAAGGCGACGGATTTATGGGACTGGGA-GAGCTTAAAGCGTGATATT 483318 Query 76478 AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG--GCACCAATGCCAACAGCCTCCACCG 76535 ||| || ||| | || ||||| | || ||||||||||| || || || || Sbjct 483319 TCCGAGTTTGGACTTAGGAAT--TCTTTAGTTGTCGCACCAATGCCCACCGCTTCGACTT 483376 Query 76536 CACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAA 76595 | ||||| | ||| || || || ||||||||| |||| |||| || || || Sbjct 483377 CGCAAATTCTTGGTTTCAACGAGTGTTTTGAACCAATCACATCAAATATATATACTCGAC 483436 Query 76596 GAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGA 76655 | ||| | || || || |||||||| | | || || | || || | Sbjct 483437 GGGTCCTTTCTGGCGAATTCCAAATTGTCAATGAATATCTTGTAAGGGATCTAGCCCAAT 483496 Query 76656 TTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAA 76715 | ||| | ||| ||||| | | | | || | | | ||| || || |||| Sbjct 483497 TAGGTTTGTGGAATGCTGATATCAGGCACATGATAATTAGTCAAGATGGCTCTATCCAAA 483556 Query 76716 ATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGA 76775 | || || || |||| ||| | ||| | | || || | |||||| | | Sbjct 483557 ACATTAATGAGATTCCAGGCGATTTGAAGGAGATATATAAGACGGCCTGGGAATTGAGCC 483616 Query 76776 TGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTA 76835 ||||| | || || |||||||| || || ||||| | |||||| || |||||||| Sbjct 483617 AGAAAGTGATAATCGATATGGCCGCCGACCGCGGTCGATACATTGACCAGTCTCAAAGTA 483676 Query 76836 TGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGT 76895 ||||| | |||||| ||| ||| || | ||| || || ||||||| | |||| | Sbjct 483677 TGAATATTTTCATGAAAAATCCCACTACTGGCAAACTTACTAGTATGCATTTCTACGGCT 483736 Query 76896 GGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGCG 76942 |||| |||| ||||| || |||||||| ||| | ||| |||| ||| Sbjct 483737 GGAAGAAGGGACTCAAGACAGGAATGTATTATTTACGAACAAAAGCG 483783 >seq43 Length=391780 Score = 102 bits (112), Expect = 1e-16 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||||||||| ||||| || |||| | ||| || ||||| || ||||| | Sbjct 82116 GGTGCCAAGATCCCTCGAGGTGCTGTTCTTTCTGGTCCTCCTGGTACTGGTAAGACTTTA 82057 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 || || ||||| || ||||| || ||| ||||| || | || |||| | | | Sbjct 82056 CTTGCTAAAGCCACAGCTGGTGAGGCAGGTGTACCATTTTTCTCTGTA-TCTGGCTCGGA 81998 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || |||||||||||||||||||| ||||| | |||| | ||||| |||| | || Sbjct 81997 ATTCGTGGAGATGTTTGTTGGTGTTGGTGCTAGCCGGGTGAGAGATCTATTTGCTACAGC 81938 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || | | || ||||||| || ||||||||||||||||| Sbjct 81937 TCGTAAGGAGGCTCCTAGTATTGTATTTATTGATGAGATTGATGC 81893 >seq78 Length=1347436 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || ||||| || |||| || || ||| ||||||||||||||||| || |||| Sbjct 284709 CCTTTGCTGAGCGTCTCGTTGCTTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCAT 284650 Query 65129 TCTGCGC-TATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 | ||| ||| | ||||||||||||||| ||||| ||||| || | ||||| ||| Sbjct 284649 T-TGCTAGTATCTTTTGGTTGAAGAAGCGTGGTCTTATGCCTGGTTTGACTTTCTCTAAT 284591 Query 65188 GAACTTATTTCCCGAGATGAGGG 65210 || | ||||| || ||||| || Sbjct 284590 GAGTTGATTTCTCGTGATGAAGG 284568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568362118080