Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq111 105 1e-17
seq32 102 1e-16
seq90 95.1 2e-14
>seq111
Length=751517
Score = 105 bits (116), Expect = 1e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||| || || || || || | |||| ||| || || || |||||
Sbjct 299259 ATACCACCTCTCAAACGGAGGACAAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCA 299200
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||||| ||| || | ||| || || || || || | | |||||||| ||
Sbjct 299199 GAAAGGGTTCTGCCATCTTCGAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGG 299140
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || || || || ||||| || | ||| ||| || |||||||||||
Sbjct 299139 GGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCGGAAGACTCG 299080
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
|| || || || || || ||||| || || || || || ||
Sbjct 299079 ACCTCGAGGGTGATGGTCTTACCAGTAAGGGTCTTGACGAA 299039
>seq32
Length=396137
Score = 102 bits (112), Expect = 1e-16
Identities = 164/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | || ||||| || | || | || | ||| || || ||
Sbjct 380742 ATTTGCATACCACCACGCAGACGAAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTG 380801
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| | ||||| ||| || | ||| || || || ||||| || | ||||||
Sbjct 380802 TAGTCGGAAAGGGTTCTTCCATCCTCAAGTTGCTTACCAGCGAAAATCAAACGCTGTTGG 380861
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || || || || ||||| || ||||| || | || || || ||||||
Sbjct 380862 TCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTAACGTTGTCGATGGTGTCGGAA 380921
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || ||||| || || || || || || ||||||||
Sbjct 380922 GACTCGACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 380977
>seq90
Length=207308
Score = 95.1 bits (104), Expect = 2e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | ||| || || ||||| || || | |||||||| || || ||||| || ||
Sbjct 159135 TCCTCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTG 159194
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || ||||| || | ||| || || |||||||||||||| || || || ||
Sbjct 159195 TCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATG 159254
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| || || || || || || ||||||||
Sbjct 159255 GTCTTACCGGTAAGGGTCTTGACGAAAATTTGCAT 159289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652533217120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |