Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq32 104 4e-17
seq90 84.2 4e-11
>seq32
Length=396137
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || | || | ||||| ||| || ||| || || ||
Sbjct 381204 ATACCACCACGGAGACGAAGGACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTCA 381263
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || || | ||| ||||||||||| || | ||| |||||||| ||
Sbjct 381264 GAAAGAGTTCTGCCATCCTCGAGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGG 381323
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || ||||| || || || | || |||||| || || || || || |||
Sbjct 381324 GGAATACCCTCCTTATCCTGAATCTTGGTCTTAACATTATCGATGGTGTCAGAAGACTCT 381383
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| || || |||||||| | || || | ||| || |||||
Sbjct 381384 ACTTCGAGAGTGATAGTCTTACCAGTGAGAGTCTTGACGAAGATTTGCAT 381433
>seq90
Length=207308
Score = 84.2 bits (92), Expect = 4e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || |||||| | || || | || | || | ||||| ||| || || ||
Sbjct 159054 TTCTTACCACCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTG 159113
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
||||| || | || || |||| || | ||| ||||||||||| || || | |||||
Sbjct 159114 TAATCAGAAAGAGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGA 159173
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| || || ||||| || || ||||| || || | || ||||| || || || ||
Sbjct 159174 TCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAA 159233
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || || || ||||| ||||| || | || || | ||| || |||||
Sbjct 159234 GACTCAACCTCGAGGGTGATGGTCTTACCGGTAAGGGTCTTGACGAAAATTTGCAT 159289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905134121842800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |