Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq87 86.0 8e-12
>seq87
Length=222757
Score = 86.0 bits (94), Expect = 8e-12
Identities = 155/224 (69%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458
|||| || |||||| || | || || || || ||||| ||| | | |||| ||| |
Sbjct 41004 AAGAGCTGTTATGGTTTGTAAAGGGCTCTACCGATTCCAAATTACTCTCGGATAGAGGCG 40945
Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAA- 172517
|| | | ||| ||| ||||| | || ||| ||||| | | || | || | |
Sbjct 40944 TTCACATATGGGATGGAAATGGAAGCAGAGAGTTTCTAGATAAACGAGGACT-ACAGCAT 40886
Query 172518 AGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAA 172577
||| ||||| ||| |||| || | ||||||||||||||| | ||| || || ||
Sbjct 40885 AGACGCGAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGTGCCAAA 40826
Query 172578 TATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCA 172621
||| ||||||||||||||||| || ||| | |||||||| ||
Sbjct 40825 TATGAAGACTGTGATACAGATTATACTGGAAAGGGAGTGGATCA 40782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632488287584080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |