Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq87 86.0 8e-12 >seq87 Length=222757 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 |||| || |||||| || | || || || || ||||| ||| | | |||| ||| | Sbjct 41004 AAGAGCTGTTATGGTTTGTAAAGGGCTCTACCGATTCCAAATTACTCTCGGATAGAGGCG 40945 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAA- 172517 || | | ||| ||| ||||| | || ||| ||||| | | || | || | | Sbjct 40944 TTCACATATGGGATGGAAATGGAAGCAGAGAGTTTCTAGATAAACGAGGACT-ACAGCAT 40886 Query 172518 AGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAA 172577 ||| ||||| ||| |||| || | ||||||||||||||| | ||| || || || Sbjct 40885 AGACGCGAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGTGCCAAA 40826 Query 172578 TATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCA 172621 ||| ||||||||||||||||| || ||| | |||||||| || Sbjct 40825 TATGAAGACTGTGATACAGATTATACTGGAAAGGGAGTGGATCA 40782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632488287584080