Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq90 122 8e-23
seq32 116 3e-21
seq111 104 2e-17
>seq90
Length=207308
Score = 122 bits (134), Expect = 8e-23
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|||||||| || || | || || || |||||||| || || || ||||| || || |
Sbjct 159292 ACGATGCAAATTTTCGTCAAGACCCTTACCGGTAAGACCATCACCCTCGAGGTTGAGTCT 159233
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
||||||| | || | || || |||||||||||||| || ||||| || || |||
Sbjct 159232 TCCGACACCATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCAGAT 159173
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|||||||||||||||||||| || || || || ||||| | | | || |||||
Sbjct 159172 CAACAACGTTTGATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACTCTTTCTGATTAC 159113
Query 24881 AACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||||| || || || |||
Sbjct 159112 AACATCCAAAAGGAGTCTACTCTCCAC 159086
>seq32
Length=396137
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || ||||| || || || || || || || | ||
Sbjct 380977 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTTGAGGTCGAGTCTTCC 380918
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| || || |||||||||||| || || || || || || ||
Sbjct 380917 GACACCATCGACAACGTTAAGACCAA-GATCCAAGACAAGGAGGGCATTCCCCCAGACCA 380859
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| |||||||| || || || || || || |||||| |||| | | || || || ||
Sbjct 380858 ACAGCGTTTGATTTTCGCTGGTAAGCAACTTGAGGATGGAAGAACCCTTTCCGACTACAA 380799
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| |||||||| || || || ||||| || | || |||| || ||
Sbjct 380798 CATCCAAAAGGAGTCCACTCTCCACTTAGTCCTTCGTCTGCGTGGTGG 380751
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || | || ||||| || || || |||||||| ||| | ||
Sbjct 381205 ATGCAAATCTTCGTCAAGACCTTGACTGGTAAGACCATCACTCTCGAAGTTGAATCTTCC 381146
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | ||| || || |||||||||||| || || || || || || ||
Sbjct 381145 GACACCATCGATAATGTTAAGACCAA-GATCCAAGACAAGGAGGGTATTCCCCCAGACCA 381087
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| |||||||| || || || || || || |||||| | | | || ||||| ||
Sbjct 381086 ACAGCGTTTGATTTTCGCTGGTAAGCAACTCGAGGATGGCCGTACTCTTTCTGATTACAA 381027
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| ||||| ||||| || || ||||||||
Sbjct 381026 CATCCAAAAAGAATCCACTCTCCACTTGGT 380997
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| || || || || ||||| || || | |
Sbjct 380749 ATGCAAATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCT 380690
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || || || |||||||||||| || || || || || || ||
Sbjct 380689 GACACCATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAGGGCATTCCCCCAGACCA 380631
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||| | ||||| || || || ||| |||| || |||| | | || || || ||
Sbjct 380630 ACAACGTCTTATCTTCGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTCTCTGACTACAA 380571
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || ||||| || || || ||||||||
Sbjct 380570 CATCCAGAAGGAGTCCACCCTCCACTTGGT 380541
Score = 102 bits (112), Expect = 7e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || ||||| ||||| || ||||||||||| | |
Sbjct 381433 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAGACTATCACTCTCGAAGTAGAGTCTTCT 381374
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | ||| || || ||| || || || || || || || || || ||
Sbjct 381373 GACACCATCGATAATGTTAAGACCAA-GATTCAGGATAAGGAGGGTATTCCCCCAGACCA 381315
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | | |||||||| || || || || |||||| |||| | || || || ||
Sbjct 381314 ACAAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGCAGAACTCTTTCTGACTACAA 381255
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
|||||||||||| || || || |||
Sbjct 381254 CATTCAAAAGGAGTCTACTCTCCAC 381230
>seq111
Length=751517
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || ||||| || || || ||||| || || | ||||||| | || |
Sbjct 299045 AAGACCCTTACTGGTAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATTGACAAT 299104
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||| ||||| |||||||| || || |||||||||||| | |||||
Sbjct 299105 GTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAACAACGTCTTATCTTC 299164
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || || || || ||| |||| | | || || || ||||| |||||||| ||
Sbjct 299165 GCTGGTAAGCAACTCGAAGATGGCAGAACCCTTTCTGACTACAACATCCAAAAGGAGTCT 299224
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||| | || | || ||| | || ||
Sbjct 299225 ACTCTTCACCTTGTCCTCCGTTTGAGAGGTGG 299256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896666462480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |