Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq86 114 2e-19
>seq86
Length=238301
Score = 114 bits (126), Expect = 2e-19
Identities = 172/242 (71%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| || |||||| || |||||||||||| |||||| || ||| | |
Sbjct 99245 TGTACTTGGTGACAGCACGGGTACCTTCAGAGACGGCGTGCTTGGCCAACTCACCGGGGA 99186
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
||| || | || ||||| ||||| || || | | || ||| | |||||| ||
Sbjct 99185 GGATGAGTCTGACAGCGGTTTGGATTTCACGAGAAGCAATGGTGCTCTTCTTGTT-GTAA 99127
Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| |||| | |||||| || ||| || |||| || ||||||||||| ||||||
Sbjct 99126 GCAGCCAACTTGGAGGCCTCAGTAGCGACACGCTCGAAGATATCGTTGACAAAAGAGTTC 99067
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| | | | ||||| || |||||| || ||||| || ||||||
Sbjct 99066 ATGATAGACATGGCACGGGTAGAGATACCGGTGTCGGGATGGGTTTGCTTAAGAACCTTG 99007
Query 1485709 TA 1485710
||
Sbjct 99006 TA 99005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916228741822874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |