Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq32 122 6e-23
seq90 82.4 5e-11
>seq32
Length=396137
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | |||| ||||||||| ||||| ||||| || ||| | | | ||
Sbjct 380538 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCT 380597
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || |||||||| || ||||| |||||| | || | |||||||||||
Sbjct 380598 TCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 380657
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| | |||||| || | ||| ||||||
Sbjct 380658 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTC 380717
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| |||||||| |||||
Sbjct 380718 TTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| | ||| | ||| |||||| || ||||| ||||| || ||| | | ||||
Sbjct 380766 AGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCC 380825
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || ||||| |||| || || |||||| | || | |||||||||||
Sbjct 380826 TCAAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 380885
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | |||||| |||| ||| ||||||
Sbjct 380886 TGGATCTTGGTCTTAACGTTGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTC 380945
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||||||||| || ||||| |||||
Sbjct 380946 TTACCAGTGAGGGTCTTGACGAAGATTTGCAT 380977
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| || |||||| || ||||| ||||| || || | || ||||
Sbjct 381450 AGGACGAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCC 381509
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||| |||| ||| |||||| | || | |||||||||||
Sbjct 381510 TCGAGTTGCTTGCCAGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCT 381569
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | || | ||| | ||||| |||| ||| || |||
Sbjct 381570 TGGATCTTGGTCTTGACATTGTCAATAGTATCAGAAGATTCGACCTCAAGGGTAATAGTC 381629
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| || ||||| |||||
Sbjct 381630 TTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 381661
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| || || || ||||| || || || || | || | ||
Sbjct 381678 AGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCT 381737
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| || ||||| |||| || || |||||| | || | || ||||||||
Sbjct 381738 TCCAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTC- 381796
Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
|| | | || || |||||| | || | ||| | |||||| |||| || |||||
Sbjct 381797 TTGAATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGT 381856
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||| || || ||||||||||| ||||| ||||| ||
Sbjct 381857 CTTACCAGTAAGGGTCTTTACGAAGATTTGCATTAT 381892
>seq90
Length=207308
Score = 82.4 bits (90), Expect = 5e-11
Identities = 149/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || |||||| || ||||| || || || || | || | ||
Sbjct 159078 AGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCC 159137
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || ||||||| ||||| || ||| | || | |||||||||||
Sbjct 159138 TCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCT 159197
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | ||| || || | ||| ||
Sbjct 159198 TGGATCTTGGTCTTGAC--AT--TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGAT 159253
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || |||||||| || || || |||||
Sbjct 159254 GGTCTTACCGGTAAGGGTCTTGACGAAAATTTGCAT 159289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692141082754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |