Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq32 89.7 4e-13
>seq32
Length=396137
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || ||||| ||| | || || || || || || ||||| ||| ||
Sbjct 381433 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAGACTATCACTCTCGAAGTAGAGTCTTCT 381374
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | || || |||||| ||||| || || | ||| || ||
Sbjct 381373 GACACCATCGATAATGTTAAGACCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAA 381314
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| |||||||| | ||| ||||| || || ||||| | || ||| | | |||||||||
Sbjct 381313 CAAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGCAGAACTCTTTCTGACTACAAC 381254
Query 107736 ATTCAAAAGGAGTCTAC 107752
|||||||||||||||||
Sbjct 381253 ATTCAAAAGGAGTCTAC 381237
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| |||||||| ||| | || ||||| ||||| ||| |||| ||| ||
Sbjct 380749 ATGCAAATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCT 380690
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || ||||| || || || ||| | ||| || ||
Sbjct 380689 GACACCATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 380630
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| | ||||| | || ||||| ||| |||| |||| || ||| | | |||||||||
Sbjct 380629 CAACGTCTTATCTTCGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTCTCTGACTACAAC 380570
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|| || |||||||| || | ||| ||||
Sbjct 380569 ATCCAGAAGGAGTCCACCCTCCACTTGGT 380541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398875993022374
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |