Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq87 84.2 3e-11
>seq87
Length=222757
Score = 84.2 bits (92), Expect = 3e-11
Identities = 159/230 (69%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 168521 TCTTA-AAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATA 168579
||||| |||| || |||||| || |||| || || || ||||| ||| | | ||||
Sbjct 41010 TCTTAGAAGAGCTGTTATGGTTTGTAAAGGGCTCTACCGATTCCAAATTACTCTCGGATA 40951
Query 168580 TAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTA 168639
||| ||| | | ||| | | ||||| | || ||| ||||| | | || | |
Sbjct 40950 GAGGCGTTCACATATGGGATGGAAATGGAAGCAGAGAGTTTCTAGATAAACGAGGACT-A 40892
Query 168640 CCGAA-AGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGA 168698
| | | ||| ||||| ||| |||| || | ||||||||||||||| | ||| ||
Sbjct 40891 CAGCATAGACGCGAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGT 40832
Query 168699 GCTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCA 168748
|| ||||| ||||||||||||||||| || ||| | ||||| || ||
Sbjct 40831 GCCAAATATGAAGACTGTGATACAGATTATACTGGAAAGGGAGTGGATCA 40782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635176282006480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |