Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq87 82.4 1e-10 >seq87 Length=222757 Score = 82.4 bits (90), Expect = 1e-10 Identities = 158/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 171607 CTTA-AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATAT 171665 |||| |||| || |||||| || | || || || || ||||| ||| | | |||| Sbjct 41009 CTTAGAAGAGCTGTTATGGTTTGTAAAGGGCTCTACCGATTCCAAATTACTCTCGGATAG 40950 Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 171725 ||| ||| | | ||| ||| ||||| | || ||| ||||| | | || | || Sbjct 40949 AGGCGTTCACATATGGGATGGAAATGGAAGCAGAGAGTTTCTAGATAAACGAGGACT-AC 40891 Query 171726 TGAA-AGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784 | | ||| ||||| ||| |||| || | ||||||||||||||| | ||| || | Sbjct 40890 AGCATAGACGCGAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGTG 40831 Query 171785 CTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCA 171833 | ||||| |||||| |||||||||| || ||| | |||||||| || Sbjct 40830 CCAAATATGAAGACTGTGATACAGATTATACTGGAAAGGGAGTGGATCA 40782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628529895797760