Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq87 82.4 1e-10
>seq87
Length=222757
Score = 82.4 bits (90), Expect = 1e-10
Identities = 158/229 (69%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 171607 CTTA-AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATAT 171665
|||| |||| || |||||| || | || || || || ||||| ||| | | ||||
Sbjct 41009 CTTAGAAGAGCTGTTATGGTTTGTAAAGGGCTCTACCGATTCCAAATTACTCTCGGATAG 40950
Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 171725
||| ||| | | ||| ||| ||||| | || ||| ||||| | | || | ||
Sbjct 40949 AGGCGTTCACATATGGGATGGAAATGGAAGCAGAGAGTTTCTAGATAAACGAGGACT-AC 40891
Query 171726 TGAA-AGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784
| | ||| ||||| ||| |||| || | ||||||||||||||| | ||| || |
Sbjct 40890 AGCATAGACGCGAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGTG 40831
Query 171785 CTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCA 171833
| ||||| |||||| |||||||||| || ||| | |||||||| ||
Sbjct 40830 CCAAATATGAAGACTGTGATACAGATTATACTGGAAAGGGAGTGGATCA 40782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628529895797760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |