Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq155 194 4e-44
seq79 123 6e-23
seq78 100 7e-16
>seq155
Length=566151
Score = 194 bits (214), Expect = 4e-44
Identities = 569/865 (66%), Gaps = 25/865 (3%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| | ||| ||||||||| | | ||||| ||| | ||| ||| |
Sbjct 481963 TATTTTGGGTACAAGACTCTTGAAAGGTCGTATTTGCTTAAAATGTTCGGCAGAATCGTC 482022
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT--A 110421
|| | || ||||| ||||| | | || || | ||||| || ||| |||||||| |
Sbjct 482023 GAGAGGCCCCAACAGATGTTAATGAGAGTGGCTGTGGGTATCCACGGAAATGATATTCCA 482082
Query 110422 AAGCTGTTATTGAATGTTAT-GATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480
||| || || ||| ||| ||| || ||||| | | | ||||||| | ||
Sbjct 482083 AAGGTGATA--GAAACATATCGATTGATGTCTGAAAAATACTTC-ACTCATGCTTCACCA 482139
Query 110481 ACCCTATTTAACGCAGGAACT---AATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537
|| ||||||| | || || ||| || || | ||||||||| | | |
Sbjct 482140 ACTTTATTTAATTCTGGTACACCCAATCCTCAACTATCG---TCTTGCTTTTTAGTGGCT 482196
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| | ||||||||||| || |||||||| ||| | | || || ||| | || |||
Sbjct 482197 ATGAGAGATGATTCTATCGAGGGTATTTACGATACCTTGAAGGATTGTGCGATGATATCT 482256
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|||| | || |||||||| |||| || ||| ||||||| || | ||| | ||||
Sbjct 482257 AAAACTGCCGGTGGAATTGGCCTTCATGTACATAATATTCGTTCCACTGGAACGTATATT 482316
Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717
|| | || || |||| | ||| |||| ||||||||| |||| | ||| | |||
Sbjct 482317 GCTGGAAGCAATGGAACTTCGAACGGAATTGTGCCAATGTTACGAGTTTACAATAATACT 482376
Query 110718 GCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774
|| ||||| ||||||| || ||| | ||| | |||||||| ||| | |||
Sbjct 482377 GCTCGGTATGTCGATCAAGGCGGAAACAAGCGGCCTGGTGCTTTTGCTATTTATTTAGAA 482436
Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834
||||||||| |||||||| |||||||||| | || ||||| || || || ||
Sbjct 482437 CCTTGGCATGGTGATATATTCCAATTCTTAGACTTGCGGAAAAACCATGGCAAAGAGGAG 482496
Query 110835 CAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTT 110894
| ||||| || ||| ||||||| || | ||||| | ||||| || ||||| ||
Sbjct 482497 CTGAGAGCTCGAGATCTATTTTACGCTCTCTGGATCCCGGATTTGTTTATGAAGAAAGTC 482556
Query 110895 CAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTA 110954
|| || |||| |||| |||| | | | | | | | ||||| | | |||||
Sbjct 482557 CACGATAATGAAGAATGGTGTCTTTTTTCTAATGACCAGGCACCTGGCTTGGCAGATGTT 482616
Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA----GGCAAGTTTCG 111010
|||||| | || ||||||| | ||| | |||||| || ||| | ||| || ||
Sbjct 482617 TATGGAGATGAATTTGAAGCGTTATACAATCGATATGAGAAGGAAAATCGACAA-TTGCG 482675
Query 111011 CAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070
|| || || ||| || | |||||||| || || ||| |||| | || |||||
Sbjct 482676 CA---AAGTTAAAGCCCAGAAGCTTTGGTTTGCGATACTAGAAGCACAGATCGAGACTGG 482732
Query 111071 AACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAG 111129
| ||| | ||| | ||||||||| ||| || || || || || || | ||| | |
Sbjct 482733 TAATCCATTTATGCTATATAAAGATGCAT-GCAACCGGAAGTCAAACCAGAATAATCTTG 482791
Query 111130 GAACAATTAAGTCTAGTAATTTGTG 111154
| |||||||| || ||||||||
Sbjct 482792 GCACAATTAAATCGTCAAATTTGTG 482816
>seq79
Length=299291
Score = 123 bits (136), Expect = 6e-23
Identities = 332/500 (66%), Gaps = 11/500 (2%)
Strand=Plus/Plus
Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726
|| ||| |||| | || |||| || ||||| ||||| |||||| ||||||| | ||||
Sbjct 118467 AACGGTACTTCTAACGGTATTGTCCCTATGTTGAGAGTTTTCAACAACACTGCTAGATAT 118526
Query 110727 GTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783
|| | ||||||||| |||||| || | || || || || | || ||||||||
Sbjct 118527 GTTGACCAAGGTGGTAACAAGAGACCAGGTGCTTTCGCCATGTACTTGGAGCCTTGGCAC 118586
Query 110784 TCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCA 110843
||| | ||||||||| | || | || || || || || |||||| | ||
Sbjct 118587 GACGATGTTTTTGAATTCATCGACTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGTGCC 118646
Query 110844 CGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAAT 110903
| ||||| || | || | ||||| | || || |||||||| | || | | ||
Sbjct 118647 AGAGATTTGTTCTTGGCCCTTTGGATCCCCGACTTGTTCATGAAGAGAGTCAAGGCTAAC 118706
Query 110904 G-GCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAA 110962
| | || ||| || | ||||| ||| || | ||||||| | || || |||||| |
Sbjct 118707 GAGGAT-TGGACTTTGATGTGCCCTAATGAGTGTCCTGGTTTGGACGAGGTCTATGGAGA 118765
Query 110963 AGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCC 111022
|| |||| | ||| || ||||| ||||||||||||||||| | | || || | |
Sbjct 118766 CGAATTTGTTGCCCTCTATGAAAAGTATGAAAAAGAAGGCAAAGGTAG--AAGAACTATC 118823
Query 111023 A--GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG-AACTCCTTA 111079
| ||||| | || |||| |||||||| | ||| ||| ||||| ||| ||||
Sbjct 118824 AAGGCTCAGAAGCTCTGGTATGCTATCCTTGAGGCCCAAACTGAGACTGGTAACCCCTT- 118882
Query 111080 TATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAA 111139
|| | || || ||| | ||| |||| ||||||| || | || || || ||
Sbjct 118883 CATGCTCTACAAGGATGCTTGTAACAGCAAGAGTAATCAACAAAACCTGGGTACTATCAA 118942
Query 111140 GTCTAGTAATTTGTGCTGTG 111159
||| || ||||||||||
Sbjct 118943 ATCTTCCAACTTGTGCTGTG 118962
>seq78
Length=1347436
Score = 100 bits (110), Expect = 7e-16
Identities = 456/717 (64%), Gaps = 11/717 (2%)
Strand=Plus/Minus
Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524
||||| ||| || ||| || | |||||||||| ||||||||| ||| | || |||
Sbjct 285094 ATGTACAAGCAAGCTGAGGCCTCTTTCTGGACTGCTGAAGAGATTGATCTTGGAAAGGAT 285035
Query 131525 ATTGATGATTGGGAAAAA----TTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCT 131580
||| ||| |||||| | |||| ||| ||| | | ||| | || || ||
Sbjct 285034 ATTAGTGACTGGGAACACCGTCTTAATGATGA-TGAGAGATTCTTTATCTCTCGTGTGCT 284976
Query 131581 TGCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCA 131640
|| ||||| || | ||||| ||||| | ||| || |||||| | ||| |
Sbjct 284975 CGCTTTCTTTGCTGCCTCCGATGGTATTGTCAATGAGAACCTTGTTGAGAGATTCTCTGG 284916
Query 131641 AGAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCC--GCTGTTGAATCT 131698
|| | | |||||||| | | | |||||| ||| ||| | | || ||||
Sbjct 284915 TGAGGTCCAGATTCCTGAGGCCAAGTGTTTCTACGGATTCCAAATCATGATGGAGAAT-- 284858
Query 131699 ATTCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAA 131758
|| ||| |||| || || ||| | ||||| | | | | || ||| | ||
Sbjct 284857 ATCCATGCTGAGACTTACTCCTTACTTATTGATACTTATATCAAGGATGCTAAGGAGGCT 284798
Query 131759 AATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCT 131818
|| || || ||||| | |||| ||||| ||||| ||||| || || |||||
Sbjct 284797 AACTTCTTGTTCCATGCTATTGATAACATTCCTTGTATTAAGAAGAAGGCTGACTGGGCC 284738
Query 131819 ATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGT 131878
| | ||||| |||||| ||| ||| || | || || ||||| ||| |
Sbjct 284737 CTAACTTGGATCTCTGATGATCAATCTACCTTTGCTGAGCGTCTCGTTGCTTTCGCTGCT 284678
Query 131879 GTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGA 131938
|| || ||||| ||||| || ||| | || | |||||||||| | |||||||||||
Sbjct 284677 GTCGAGGGTATCTTCTTCTCTGGTTCATTTGCTAGTATCTTTTGGTTGAAGAAGCGTGGT 284618
Query 131939 TTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACT 131998
| |||||||| | | || || ||| | || || || | ||||||| |||| |||
Sbjct 284617 CTTATGCCTGGTTTGACTTTCTCTAATGAGTTGATTTCTCGTGATGAAGGCATGCACACT 284558
Query 131999 GAATTTGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATATTAAA 132058
|| || ||| || | | | | | ||| | | || | | | | | || ||
Sbjct 284557 GATTTCGCTTGTTTGCTTTTTGGCCACCTTGTCAACAGACCTAAGAAGTCTGTTGTTGAA 284498
Query 132059 CAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGC 132118
| |||| | ||||| || | ||| || ||||| || | || || || ||||| ||
Sbjct 284497 AAGATTATTACTGAAGCTGTCGGTATTGAAAAGGAATTCTTGACTGATGCCTTGCCATGT 284438
Query 132119 AATTTGATTGGGATGAATGCTGA-CTCTATGAAGGAGTACATTGAATTCGTTGCTGA 132174
| | | |||| ||||||||| | ||| ||| | |||||||| || || |||||
Sbjct 284437 AGTCTTCTTGGAATGAATGCTAAGCTC-ATGTGTCAATACATTGAGTTTGTCGCTGA 284382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186810275797526
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