Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq32 122 6e-23 seq90 91.5 1e-13 >seq32 Length=396137 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || |||||| |||||||| ||||||||||| || Sbjct 381662 ACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGA 381721 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| |||| ||| || || || |||||||||||||| || ||| | || Sbjct 381722 AAGAGTACGACCGTCTTCCAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGG 381781 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | || | ||| | |||||| || || | Sbjct 381782 AATACCTTCCTTGTCTTGAATCTT-GGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGA 381840 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || ||||| || | || ||||| ||||| ||||| Sbjct 381841 CCTCAAGAGTGATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCAT 381889 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || |||||| |||||||| ||||||||||| || Sbjct 380978 ACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGA 381037 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| || || || |||||||||||||| || ||| | || Sbjct 381038 AAGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGG 381097 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || || || | ||||| || | ||||||| ||||| | Sbjct 381098 AATACCCTCCTTGTCTTGGATCTT-GGTCTTAACATTATCGATGGTGTCGGAAGATTCAA 381156 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || || || || || ||||| |||||| Sbjct 381157 CTTCGAGAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCATA 381206 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | || || || |||||| ||| ||||| |||||||| ||||| Sbjct 380750 ACCACCACGCAGACGAAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 380809 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | | || || | ||| || || || |||||||||||||| || ||| | || Sbjct 380810 AAGGGTTCTTCCATCCTCAAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGG 380869 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | ||| | ||| | ||||||| || || | Sbjct 380870 AATGCCCTCCTTGTCTTGGATCTT-GGTCTTAACGTTGTCGATGGTGTCGGAAGACTCGA 380928 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || ||||| || | || || || ||||| |||||| Sbjct 380929 CCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCATA 380978 >seq90 Length=207308 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | || | || ||||| ||| ||||| ||||||||||| | Sbjct 159061 CACCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAATCAG 159120 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || || |||| || | ||| || || ||||| |||||||| || |||||| | | Sbjct 159121 AAAGAGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGG 159180 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || || | |||| ||| | ||||||| || || Sbjct 159181 GAATTCCCTCCTTGTCTTGGATCTT-GGTCTTGACATTGTCGATGGTGTCGGAAGACTCA 159239 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 || || | ||||| || ||||| || | || || || || || ||||| ||| Sbjct 159240 ACCTCGAGGGTGATGGTCTTACCGGTAAGGGTCTTGACGAAAATTTGCATCGTT 159293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703334990720