Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq32 109 1e-18 seq111 96.9 8e-15 >seq32 Length=396137 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || |||||| | ||||| || ||||||||| |||| Sbjct 381419 CAAGACTCTCACTGGTAAGACTATCACTCTCGAAGTAGAGTCTTCTGACACCATCGATAA 381360 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || ||| || ||| |||||||||||||| Sbjct 381359 TGTTAAGACCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAACAAAGACTTATCTT 381300 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| | || ||||| || ||| | | || |||||| | || || ||||| Sbjct 381299 TGCTGGTAAGCAACTCGAGGATGGCAGAACTCTTTCTGACTACAACATTCAAAAGGAGTC 381240 Query 206364 TACTCTTCACCTTGT 206378 |||||| ||||| || Sbjct 381239 TACTCTCCACCTCGT 381225 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || || || || ||||| | || || || ||||||| Sbjct 380746 CAAATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCTGAC 380687 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || ||| || ||| ||| Sbjct 380686 ACCATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAA 380627 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||||||||||| || || || | | || |||||| || Sbjct 380626 CGTCTTATCTTCGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTCTCTGACTACAACATC 380567 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| || || ||| Sbjct 380566 CAGAAGGAGTCCACCCTCCAC 380546 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| | || || || ||||||||| |||| Sbjct 381874 AAGACCCTTACTGGTAAGACCATCACTCTTGAGGTCGAGTCTTCTGACACCATCGACAAC 381815 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || ||||| ||| || ||| || | | || ||| Sbjct 381814 GTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAGCGTTTGATTTTC 381755 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||| || | ||| | | ||||||||| |||| ||||| || Sbjct 381754 GCTGGTAAGCAACTGGAAGACGGTCGTACTCTTTCTGATTACAACATCCAAAAAGAATCC 381695 Query 206365 ACTCTTCAC 206373 ||||| ||| Sbjct 381694 ACTCTCCAC 381686 >seq111 Length=751517 Score = 96.9 bits (106), Expect = 8e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||||||||| || |||| || ||||||| | || || |||||||| Sbjct 299238 ACAAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTGCCATCTTCG 299179 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || ||||| || ||||||||||| ||||||||| Sbjct 299178 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGA 299146 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || ||||| | || || || ||| ||||| | || Sbjct 299044 CAAGACCCTTACTGGTAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATTGACAA 299103 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||||||| || || ||| | |||||||| Sbjct 299104 TGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAACAACGTCTTATCTT 299163 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||| | |||||||| || || | | || |||||| |||| || ||||| Sbjct 299164 CGCTGGTAAGCAACTCGAAGATGGCAGAACCCTTTCTGACTACAACATCCAAAAGGAGTC 299223 Query 206364 TACTCTTCACCTTGT 206378 ||||||||||||||| Sbjct 299224 TACTCTTCACCTTGT 299238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818286414886