Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq32 109 1e-18
seq111 96.9 8e-15
>seq32
Length=396137
Score = 109 bits (120), Expect = 1e-18
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || || |||||| | ||||| || ||||||||| ||||
Sbjct 381419 CAAGACTCTCACTGGTAAGACTATCACTCTCGAAGTAGAGTCTTCTGACACCATCGATAA 381360
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || ||| || ||| ||||||||||||||
Sbjct 381359 TGTTAAGACCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAACAAAGACTTATCTT 381300
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || ||||| | || ||||| || ||| | | || |||||| | || || |||||
Sbjct 381299 TGCTGGTAAGCAACTCGAGGATGGCAGAACTCTTTCTGACTACAACATTCAAAAGGAGTC 381240
Query 206364 TACTCTTCACCTTGT 206378
|||||| ||||| ||
Sbjct 381239 TACTCTCCACCTCGT 381225
Score = 96.9 bits (106), Expect = 8e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| || || || || || || ||||| | || || || |||||||
Sbjct 380746 CAAATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCTGAC 380687
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || || || ||| || ||| |||
Sbjct 380686 ACCATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAA 380627
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| || |||||||||||||| || || || | | || |||||| ||
Sbjct 380626 CGTCTTATCTTCGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTCTCTGACTACAACATC 380567
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| || || |||
Sbjct 380566 CAGAAGGAGTCCACCCTCCAC 380546
Score = 84.2 bits (92), Expect = 5e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || |||||| | || || || ||||||||| ||||
Sbjct 381874 AAGACCCTTACTGGTAAGACCATCACTCTTGAGGTCGAGTCTTCTGACACCATCGACAAC 381815
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || ||||| ||| || ||| || | | || |||
Sbjct 381814 GTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAGCGTTTGATTTTC 381755
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||| || | ||| | | ||||||||| |||| ||||| ||
Sbjct 381754 GCTGGTAAGCAACTGGAAGACGGTCGTACTCTTTCTGATTACAACATCCAAAAAGAATCC 381695
Query 206365 ACTCTTCAC 206373
||||| |||
Sbjct 381694 ACTCTCCAC 381686
>seq111
Length=751517
Score = 96.9 bits (106), Expect = 8e-15
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|||||||||||||||||||| || |||| || ||||||| | || || ||||||||
Sbjct 299238 ACAAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTGCCATCTTCG 299179
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|| ||||| || ||||||||||| |||||||||
Sbjct 299178 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGA 299146
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || ||||| | || || || ||| ||||| | ||
Sbjct 299044 CAAGACCCTTACTGGTAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATTGACAA 299103
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || ||||||||| || || ||| | ||||||||
Sbjct 299104 TGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAACAACGTCTTATCTT 299163
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| | |||||||| || || | | || |||||| |||| || |||||
Sbjct 299164 CGCTGGTAAGCAACTCGAAGATGGCAGAACCCTTTCTGACTACAACATCCAAAAGGAGTC 299223
Query 206364 TACTCTTCACCTTGT 206378
|||||||||||||||
Sbjct 299224 TACTCTTCACCTTGT 299238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181818286414886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |