Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq32 93.3 4e-14 seq90 89.7 5e-13 >seq32 Length=396137 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||| ||||||||||| | | || || | || || || |||||||| || || Sbjct 381015 TCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAA 381074 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||| ||||| | |||| | ||||||||| |||||| ||| | | | Sbjct 381075 ATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTAACATTA 381134 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| ||||| || || | ||||| || ||||| ||||| || || || Sbjct 381135 TCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTACCAGTCAAGGTCTTGACG 381194 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 381195 AAGATTTGCAT 381205 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||| ||||||||||| | | || || |||| ||||| |||||||| || || Sbjct 381699 TCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCCAGTTGCTTACCAGCGAAA 381758 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||| ||||| | ||||| | |||||||| ||||| ||| | ||| Sbjct 381759 ATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGA-CGTT 381817 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || || ||||| | ||||| || ||||| || | || || || Sbjct 381818 GTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTACCAGTAAGGGTCTTTAC 381877 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 381878 GAAGATTTGCATTATG 381893 >seq90 Length=207308 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| | | || || |||| || || |||||||| ||||| Sbjct 159098 CTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCCTCAAGTTGCTTACCAGCAAA 159157 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || || || || | |||| | ||||||||| |||||| ||| | | | Sbjct 159158 GATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 159217 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || ||||| || | || || || Sbjct 159218 GTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCGGTAAGGGTCTTGAC 159277 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 159278 GAAAATTTGCAT 159289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792664603280