Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq78 138 9e-28
>seq78
Length=1347436
Score = 138 bits (152), Expect = 9e-28
Identities = 403/610 (66%), Gaps = 22/610 (4%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| |||||| |||| || || | || ||||| || |||||||||||||| |||| ||
Sbjct 285136 AGATTTGTCTTGTTCCCTATCAAGTACCATGAGATCTGGCAAATGTACAAGCAAGCTGAG 285077
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGAC-TTAGCACATTGGATTGC 43815
|| || || ||||| || ||||| ||||| | || || |||| | ||| |
Sbjct 285076 GCCTCTTTCTGGACTGCTGAAGAGATTGATCTTGGAAAGGATATTAGTGACTGGGAACAC 285017
Query 43816 A---TTAAA-ACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGA 43871
|||| | | ||| | | ||||| ||| || | || || ||||||||
Sbjct 285016 CGTCTTAATGATGATGAGAGATTC--TTTATCTCTCGTGTGCTCGCTTTCTTTGCTGCCT 284959
Query 43872 GCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAG 43931
||| || || |||||||| || | ||| | || | || || || | || |
Sbjct 284958 CCGATGGTATTGTCAATGAGAACCTTGTTGAGAGATTCTCTGGTGAGGTCCAGATTCCTG 284899
Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991
| || ||||| || || || ||||| || || ||||| ||| | || | |||
Sbjct 284898 AGGCCAAGTGTTTCTACGGATTCCAAATCATGATGGAGAATATCCATGCTGAGACTTACT 284839
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGA--AGCATCGATTGTTTAATGC 44049
| || || ||||| || ||||| |||| | ||| | | || ||||| ||||
Sbjct 284838 CCTTACTTATTGATACTTATATCAAGGATGCTAAGGAGGCTAACTTC--TTGTTCCATGC 284781
Query 44050 GATAGA-AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATT 44108
|| || |||| | | || ||||| | || || ||||||||||| | ||||| |
Sbjct 284780 TATTGATAACATTCCTTGT-ATTAAGAAGAAGGCTGACTGGGCCCTAACTTGGATC---T 284725
Query 44109 CAAATGAT---TCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162
| ||||| ||| |||| || || || || || || || | ||| || || || |
Sbjct 284724 CTGATGATCAATCTACCTTTGCTGAGCGTCTCGTTGCTTTCGCTGCTGTCGAGGGTATCT 284665
Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222
|||| || || || ||||| || |||||||| ||||| || ||| | |||||||| |
Sbjct 284664 TCTTCTCTGGTTCATTTGCTAGTATCTTTTGGTTGAAGAAGCGTGGTCTTATGCCTGGTT 284605
Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCT 44282
|||| || || |||||||| || ||||||||||||| | || ||||| ||||| |
Sbjct 284604 TGACTTTCTCTAATGAGTTGATTTCTCGTGATGAAGGCATGCACACTGATTTCGCTTGTT 284545
Query 44283 TGTTACTTGG 44292
|| | ||||
Sbjct 284544 TGCTTTTTGG 284535
Score = 93.3 bits (102), Expect = 3e-14
Identities = 225/332 (68%), Gaps = 18/332 (5%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGT--CAATCGGAAGAAA 19486
|||||||| || |||||||||||||| | || || || || ||| || | || || |
Sbjct 1161017 CCCAAAATCGTCAATGGTCCTGAAATGCTCAACAAGTACGTTGGTGGCAGT--GAGGAGA 1160960
Query 19487 ATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGT 19545
|| | || |||| |||||||| | ||| | ||| | |||||| | | |
Sbjct 1160959 ATATCCGTAACCTGTTCAAAGACGCTGAGGCTGAATACAAA-GAAAAGGGCGACGAGTCT 1160901
Query 19546 TCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT--- 19602
|| | || ||||| || | ||||||||||| || | | ||| ||||||||||||
Sbjct 1160900 GCTCTTCATATTATTATCTTCGATGAATTGGATGCTGTGTTTAAACAAAGAGGTTCTCGA 1160841
Query 19603 GGT----GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| ||| | || || || | || ||||| ||||| || | || | || ||
Sbjct 1160840 GGTGATGGTACA-GGTGTTGGCGATAACGTCGTCAACCAACTGCTTGCGAAGATGGATGG 1160782
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
||| | |||||||| || |||| |||||||| ||||| ||| ||| || || || ||
Sbjct 1160781 TGTCGAGCAACTGAACAACGTTTTGGTTATTGGTATGACCAATCGACGTGATTTGATCGA 1160722
Query 19719 --CAGCGCCTTATTACGACCCGGTCGGTTGGA 19748
| |||| | || || |||||||| || ||
Sbjct 1160721 TTCTGCGC--TTTTGCGTCCCGGTCGTTTTGA 1160692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455195896830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |