Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq79 95.1 1e-14 seq32 95.1 1e-14 seq155 93.3 4e-14 >seq79 Length=299291 Score = 95.1 bits (104), Expect = 1e-14 Identities = 283/436 (65%), Gaps = 3/436 (1%) Strand=Plus/Minus Query 130538 ATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATG 130597 ||||| | ||||| |||||||||| | || | | ||| |||||||| || | || Sbjct 119809 ATGTTCAAAGATTGACTTTGATCAATATATGCAGCACGGTCAGCAGCCATATCAATGATT 119750 Query 130598 GTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGC 130657 || || | | ||||||| | |||||||||| | || | |||| | || ||| Sbjct 119749 GTCTTTTGAGAGAGCTCCCAAACAGTCTTGTATAAAGCCTTGATGTCATCAGGAATGTTA 119690 Query 130658 GCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC 130717 | || ||||| ||| ||| | || || ||| ||| ||| ||| | | || Sbjct 119689 GGGATGTTTTGAATAGAACCATTGCTAGCAATGATTCTGTTCTTCATGTTTTCACCCCAC 119630 Query 130718 AATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCC 130777 ||||| | | |||||||| || | ||| | || | || || || || ||||| Sbjct 119629 AATCCCAAGTCGACAAGATCCTTCAACAACCATTGGTTGACAATCTGGAACTCTCCAGCA 119570 Query 130778 AGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAAT 130837 ||||| | | | ||| |||||| ||| | || ||||| |||| ||||| |||| Sbjct 119569 AGGACTCTACGAGAGTAGATGTTGGATGTGTAAGGCTCAAAACATTCATTGTTACCGAGG 119510 Query 130838 ATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGC 130897 ||||| | || | || || ||||| || || | ||||| || | |||||||||| Sbjct 119509 ATTTGGGAGGTCGAAGCAGTAGGCATAGGAGCAACGAGAAGAGAGTTTCTAAGACCGTGC 119450 Query 130898 GTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTC 130957 | | || || ||| | | |||||||||||||| || || | ||| | | Sbjct 119449 TTAGCCATCTTCTTCTTAAGAGTAGCCCAATCCCATAGATCAGTGGGAGTAACA---TCC 119393 Query 130958 CACATATCAAATTGTA 130973 ||||| || |||||| Sbjct 119392 CACATGTCGTATTGTA 119377 >seq32 Length=396137 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || |||||||| || ||||| || | | || | || ||| Sbjct 380997 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCG 381056 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || ||||| ||| |||| | ||||||||| || || || | |||||| || || | Sbjct 381057 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 381116 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | || | ||||| | | ||||||||| ||||| || | || Sbjct 381117 ATCTTGGTCTTAACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTA 381176 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || || || |||||||||||| Sbjct 381177 CCAGTCAAGGTCTTGACGAAGATTTGCATA 381206 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || |||||||| | | | | ||||||| Sbjct 380541 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCTTCC 380600 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| ||||| ||| | || ||||| ||||| || || || | ||||| || || | Sbjct 380601 AACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 380660 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | | || | ||||| | | || || || || || || | ||| Sbjct 380661 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTG 380720 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||||||| || ||||||||||||||| Sbjct 380721 CCGGTCAGAGTCTTGACAAAGATTTGCATA 380750 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||||| || |||||||| |||||||| | ||| || | || ||||| || ||||| Sbjct 381237 GTAGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGC-CATCCTCGAGTTGCTTACC 381295 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || | || || | ||||| || || || | |||||| ||||| |||||| | || Sbjct 381296 AGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGTCTT 381355 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | || | ||||| | | || ||||| ||||| |||| || || || ||||| Sbjct 381356 AACATTATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTCTTACCAGTGAGAGT 381415 Query 27230 TTTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 381416 CTTGACGAAGATTTGCATA 381434 >seq155 Length=566151 Score = 93.3 bits (102), Expect = 4e-14 Identities = 203/301 (67%), Gaps = 5/301 (2%) Strand=Plus/Minus Query 131653 CTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTC 131712 |||||||||||||||||| | ||| | ||||| || ||||||| |||| | ||| || Sbjct 482550 CTTCATAAACAAATCCGGGATCCAGAGAGCGTAAAATAGATCTCGAGCTCTCAGCTCCTC 482491 Query 131713 TGTACCCATAAttttt-ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCA 131771 | | |||| ||||| ||| | ||| || | || || || ||||||| ||||| | Sbjct 482490 T-TTGCCATGGTTTTTCCGCAAGTCTAAGAATTGGAATATATCACCATGCCAAGGTTCTA 482432 Query 131772 AATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGT 131828 |||| | || | || || ||| || |||||||||| |||| ||| | | | Sbjct 482431 AATAAATAGCAAAAGCACCAGGCCGCTTGTTTCCGCCTTGATCGACATACCGAGCAGTAT 482372 Query 131829 TGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGT 131888 | ||||| || || ||||| ||| | | ||||| | |||||||| | | ||| | Sbjct 482371 TATTGTAAACTCGTAACATTGGCACAATTCCGTTCGAAGTTCCATTGCTTCCAGCAATAT 482312 Query 131889 AGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGA 131948 | | ||| ||| | || || || || | || ||||| || ||| | |||||| | Sbjct 482311 ACGTTCCAGTGGAACGAATATTATGTACATGAAGGCCAATTCCACCGGCAGTTTTAGATA 482252 Query 131949 T 131949 | Sbjct 482251 T 482251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933540304592