Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq79 95.1 1e-14
seq32 95.1 1e-14
seq155 93.3 4e-14
>seq79
Length=299291
Score = 95.1 bits (104), Expect = 1e-14
Identities = 283/436 (65%), Gaps = 3/436 (1%)
Strand=Plus/Minus
Query 130538 ATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATG 130597
||||| | ||||| |||||||||| | || | | ||| |||||||| || | ||
Sbjct 119809 ATGTTCAAAGATTGACTTTGATCAATATATGCAGCACGGTCAGCAGCCATATCAATGATT 119750
Query 130598 GTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGC 130657
|| || | | ||||||| | |||||||||| | || | |||| | || |||
Sbjct 119749 GTCTTTTGAGAGAGCTCCCAAACAGTCTTGTATAAAGCCTTGATGTCATCAGGAATGTTA 119690
Query 130658 GCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC 130717
| || ||||| ||| ||| | || || ||| ||| ||| ||| | | ||
Sbjct 119689 GGGATGTTTTGAATAGAACCATTGCTAGCAATGATTCTGTTCTTCATGTTTTCACCCCAC 119630
Query 130718 AATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCC 130777
||||| | | |||||||| || | ||| | || | || || || || |||||
Sbjct 119629 AATCCCAAGTCGACAAGATCCTTCAACAACCATTGGTTGACAATCTGGAACTCTCCAGCA 119570
Query 130778 AGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAAT 130837
||||| | | | ||| |||||| ||| | || ||||| |||| ||||| ||||
Sbjct 119569 AGGACTCTACGAGAGTAGATGTTGGATGTGTAAGGCTCAAAACATTCATTGTTACCGAGG 119510
Query 130838 ATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGC 130897
||||| | || | || || ||||| || || | ||||| || | ||||||||||
Sbjct 119509 ATTTGGGAGGTCGAAGCAGTAGGCATAGGAGCAACGAGAAGAGAGTTTCTAAGACCGTGC 119450
Query 130898 GTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTC 130957
| | || || ||| | | |||||||||||||| || || | ||| | |
Sbjct 119449 TTAGCCATCTTCTTCTTAAGAGTAGCCCAATCCCATAGATCAGTGGGAGTAACA---TCC 119393
Query 130958 CACATATCAAATTGTA 130973
||||| || ||||||
Sbjct 119392 CACATGTCGTATTGTA 119377
>seq32
Length=396137
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || |||||||| || ||||| || | | || | || |||
Sbjct 380997 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCG 381056
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| || ||||| ||| |||| | ||||||||| || || || | |||||| || || |
Sbjct 381057 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 381116
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| | || | | || | ||||| | | ||||||||| ||||| || | ||
Sbjct 381117 ATCTTGGTCTTAACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTA 381176
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||| || || || ||||||||||||
Sbjct 381177 CCAGTCAAGGTCTTGACGAAGATTTGCATA 381206
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || || |||||||| | | | | |||||||
Sbjct 380541 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCTTCC 380600
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| ||| ||||| ||| | || ||||| ||||| || || || | ||||| || || |
Sbjct 380601 AACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 380660
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| | || | | | || | ||||| | | || || || || || || | |||
Sbjct 380661 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTG 380720
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||||||| || |||||||||||||||
Sbjct 380721 CCGGTCAGAGTCTTGACAAAGATTTGCATA 380750
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTCGTCTTCGAGCTGTTTACC 27109
||||| || |||||||| |||||||| | ||| || | || ||||| || |||||
Sbjct 381237 GTAGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGC-CATCCTCGAGTTGCTTACC 381295
Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169
|| | || || | ||||| || || || | |||||| ||||| |||||| | ||
Sbjct 381296 AGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGTCTT 381355
Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229
| | || | ||||| | | || ||||| ||||| |||| || || || |||||
Sbjct 381356 AACATTATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTCTTACCAGTGAGAGT 381415
Query 27230 TTTCACAAAGATTTGCATA 27248
|| || ||||||||||||
Sbjct 381416 CTTGACGAAGATTTGCATA 381434
>seq155
Length=566151
Score = 93.3 bits (102), Expect = 4e-14
Identities = 203/301 (67%), Gaps = 5/301 (2%)
Strand=Plus/Minus
Query 131653 CTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTC 131712
|||||||||||||||||| | ||| | ||||| || ||||||| |||| | ||| ||
Sbjct 482550 CTTCATAAACAAATCCGGGATCCAGAGAGCGTAAAATAGATCTCGAGCTCTCAGCTCCTC 482491
Query 131713 TGTACCCATAAttttt-ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCA 131771
| | |||| ||||| ||| | ||| || | || || || ||||||| ||||| |
Sbjct 482490 T-TTGCCATGGTTTTTCCGCAAGTCTAAGAATTGGAATATATCACCATGCCAAGGTTCTA 482432
Query 131772 AATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGT 131828
|||| | || | || || ||| || |||||||||| |||| ||| | | |
Sbjct 482431 AATAAATAGCAAAAGCACCAGGCCGCTTGTTTCCGCCTTGATCGACATACCGAGCAGTAT 482372
Query 131829 TGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGT 131888
| ||||| || || ||||| ||| | | ||||| | |||||||| | | ||| |
Sbjct 482371 TATTGTAAACTCGTAACATTGGCACAATTCCGTTCGAAGTTCCATTGCTTCCAGCAATAT 482312
Query 131889 AGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGA 131948
| | ||| ||| | || || || || | || ||||| || ||| | |||||| |
Sbjct 482311 ACGTTCCAGTGGAACGAATATTATGTACATGAAGGCCAATTCCACCGGCAGTTTTAGATA 482252
Query 131949 T 131949
|
Sbjct 482251 T 482251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933540304592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |