Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq79 188 9e-43
seq155 113 6e-20
seq43 104 3e-17
seq78 100 4e-16
>seq79
Length=299291
Score = 188 bits (208), Expect = 9e-43
Identities = 914/1433 (64%), Gaps = 43/1433 (3%)
Strand=Plus/Minus
Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727
||||||||| ||||| || || ||| ||| | ||||||||| | |||||| ||
Sbjct 119594 GTTGACAATCTGGAACTCTCCAGCAAGGACTCTACGAGAGTAGATGTTGGATGTGTAAGG 119535
Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
||||| |||||||| ||||| | |||||| | ||| || || || ||||| || || |
Sbjct 119534 CTCAAAACATTCATTGTTACCGAGGATTTGGGAGGTCGAAGCAGTAGGCATAGGAGCAAC 119475
Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG-- 110845
| |||| ||| | |||||| | || || | ||| ||| | |||| ||
Sbjct 119474 GAGAAGAGAGTTTCTAAGACCGTGCTTAGCCATCTTCTTCTTAAGAGTAGCCCAATCCCA 119415
Query 110846 TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGA 110905
||| | || ||| | | ||||||||||| | || | | || | || || |||
Sbjct 119414 TAGATCAG--TGGGAGTAACATCCCACATGTCGTATTGTAAAAGACCCTTAGAAGCAGGA 119357
Query 110906 GAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 110965
|| |||||| |||| || |||| || | ||||| | |||| | || |
Sbjct 119356 GATCCCTCATAGGTCTCGTAGGCGCCATATTTCTCAGCAAGTTCAATTGAAGATTCTACA 119297
Query 110966 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 111025
| || || || ||||||||| |||| || |||| | |||||||||| || ||
Sbjct 119296 GCAGCATGGTAAATGGTTTCAGAGATTTGAATGTTCAATTGCTTGGCTTCAGGAGAGTCG 119237
Query 111026 AATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 111085
|||| | ||| || || |||| || | |||||||| || | | ||||||||
Sbjct 119236 AATGGCAAACGGAGAGCCATGAAAGCATCAGCTAAACCTTGAATGCCAAGAGCAATAGGT 119177
Query 111086 CTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATG 111142
||||| || | ||| ||| | ||| ||| || ||||| || |||||||||||
Sbjct 119176 CTGTGACGGAAGTTAC---TTCTCTCAGCCTCCTTTACTGGATAGAAGTTTCTGTCAATA 119120
Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT----- 111197
| || | ||| | ||||| ||| | | ||| || || || ||| | |
Sbjct 119119 ATGACATTCAAGTTTCTAGTAACGGCCTTGGCAACTTCGTGGAGCTTCTCAAAGTTGTAC 119060
Query 111198 CAAAAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGC 111254
|| ||| | || ||| | ||| | ||||||| | || ||||| || |
Sbjct 119059 CATAAG--CCTTCATCATCACTTTCAACAAAAGCAGGAAGGGACAAAGAAGCCAAGTTAC 119002
Query 111255 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCT 111314
|||||||| || || | | |||||| | |||||| || ||||||||| |
Sbjct 119001 AAACAGCCACTTCTTCAGGAGAAGAGTACTCGACAATTTCACAGCACAAGTTGGAAGATT 118942
Query 111315 TAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGT 111374
| || || |||| || | ||| |||||||| |||| || ||||||||||||||||||
Sbjct 118941 TGATAGTACCCAGGTTTTGTTGATTACTCTTGCTGTTACAAGCATCCTTGTAGAGCATGA 118882
Query 111375 AGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGT 111433
|||| | || ||||| || || | | || ||||| | ||| | | || | | || |
Sbjct 118881 AGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGATAGCATACCAGAGCTTCTGAGCCTTG- 118823
Query 111434 ACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492
| | | | | || | || || || |||||| |||||||| |||| || ||
Sbjct 118822 ATAGT-TCTTCTACCTTTGCCTTCTTTTTCATACTTTTCATAGAGGGCAACAAATTCGTC 118764
Query 111493 ACC---CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 111549
|| ||| |||| | ||| || || | || || | | || ||| | ||
Sbjct 118763 TCCATAGACCTCGTC---CAAACCAGGACACTCATTAGGGCACATCAAAGTCCAAT--CC 118709
Query 111550 ACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607
| || ||| || | ||||||||| | ||| || ||||| |||| | || | ||||
Sbjct 118708 TCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGATCCAAAGGGCCAAGAACAAATCT 118649
Query 111608 CT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666
|| ||| || | ||||| | ||| ||||| ||| || || | ||| || | | |||
Sbjct 118648 CTGGCACGGA-CTTCTTCCTTACCGTGGTTCTTTCGCAAGTCGATGAATTCAAAAACATC 118590
Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 111722
||||||| ||||| | || | |||| || || || | | ||| |||| |
Sbjct 118589 GTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCACCTGGTCTCTTG-TTACCACCTTGGT 118531
Query 111723 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 111782
||||| | || ||| ||| || || | | ||| || | |||||| | || ||
Sbjct 118530 CAACATATCTAGCAGTGTTGTTGAAAACTCTCAACATAGGGACAATACCGTTAGAAGTAC 118471
Query 111783 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 111842
| || || || |||| || | |||| | | || ||||| || |||||||
Sbjct 118470 CGTTAGTACCGGCAATATAGGAACCAGTGGCACGGATATTGTGGATACTCAAACCAATAC 118411
Query 111843 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 111902
| || || |||| ||||| ||||| | | | ||| |||||||||| | || |
Sbjct 118410 CACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAAAGTATCATAGATACCCTCAATGG 118351
Query 111903 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 111962
|||| ||||| || | | ||| ||| ||||| || || | || ||||||||||
Sbjct 118350 AGTCATCCTTCATGTTTACCAAGAAACAAGACGACATTTGTGGCTTGGGAGTACCAGCAT 118291
Query 111963 TGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCC 112021
|| | | || || | || ||| | || ||| ||| ||||| | | ||| || ||
Sbjct 118290 TGTACAAAGTAGGAGAAGCATGAGT-AAAGTACTTTTGTGACATGTAATTGTAAGTTTCA 118232
Query 112022 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074
| | | ||||||| | || ||||| || | || || | ||||| |||
Sbjct 118231 ATGGCCTTGGCAATGTCCGCGCCATGGATACCAACAGCTACTCTCATGATCAT 118179
>seq155
Length=566151
Score = 113 bits (124), Expect = 6e-20
Identities = 695/1100 (63%), Gaps = 45/1100 (4%)
Strand=Plus/Minus
Query 110353 CGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATG 110412
||| |||| ||| | ||| ||||| || ||||||||||| | ||||| |||| | |||
Sbjct 483783 CGCTTTTGTTCGTAAATAATACATTCCTGTCTTGAGTCCCTTCTTCCAGCCGTAGAAATG 483724
Query 110413 CATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTG 110472
|||| || || ||| | || ||| ||| |||||| | |||||||||||| ||
Sbjct 483723 CATACTAGTAAGTTTGCCAGTAGTGGGATTTTTCATGAAAATATTCATACTTTGAGACTG 483664
Query 110473 GTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCA 110532
||||||| | || || || | || |||||||| || | | ||| | | ||||||
Sbjct 483663 GTCAATGTATCGACCGCGGTCGGCGGCCATATCGATTATCACTTTCTGGCTCAATTCCCA 483604
Query 110533 AACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACC 110592
| || ||| | | ||| | ||| |||| || || || || ||||| || ||
Sbjct 483603 GGCCGTCTTATATATCTCCTTCAAATCGCCTGGAATCTCATTAATGTTTTGGATAGAGCC 483544
Query 110593 -CCCCGCCT--TCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAG 110649
| | || | | |||| | | | ||||| ||| | ||| | | ||
Sbjct 483543 ATCTTGACTAATTATCATG---TGCCTGATATCAGCATTCCACAAACCTAATTGGGCTAG 483487
Query 110650 GTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTA 110709
|| | || || | | |||||||| || || || | ||| | || ||
Sbjct 483486 ATCCCTTACAAGATATTCATTGACAATTTGGAATTCGCCAGAAAGGACCCGTCGAGTATA 483427
Query 110710 GATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGC 110769
|| |||| |||| ||||||||| || || || ||| | ||||| | || || ||
Sbjct 483426 TATATTTGATGTGATTGGTTCAAAACACTCGTTGAAACCAAGAATTTGCGAAGTCGAAGC 483367
Query 110770 TGTTGGCATTGGTGC--CATCAAAAGACTGTTACGAAGACCCTTCTCCTTGAT-GCGTTC 110826
|| ||||||||||| || | ||||| || | ||| || ||| || | |
Sbjct 483366 GGTGGGCATTGGTGCGACAACTAAAGA--ATTCCTAAGTCCAAACTCGGAAATATCACGC 483309
Query 110827 CTTGAGAACATCCCAGT----------CGTAG--TTGAGCTTGGTTTCACCTTCCCACAT 110874
|| || | ||||||| ||| | |||| | | |||| ||||||
Sbjct 483308 TTTAAGCTC-TCCCAGTCCCATAAATCCGTCGCCTTGAAATCAGGCTCAC---CCCACAA 483253
Query 110875 GTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTG 110934
|| || || | || ||| | || |||||||||||| | | | || || | || |
Sbjct 483252 ATCGAATTGCAACATCCCCTTCGAAGCGGGAGAACCCGAATAACTATCGTATGGTCCGTT 483193
Query 110935 GGCTTCAGCCA-ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATAC 110993
||| || | | || || | ||||| | | || ||||| || |||||||| ||
Sbjct 483192 TTCTTTGGCTAGCTCCATAGAT-GCCTCGACTGCCGCATGATATATAGTTTCAAATATTT 483134
Query 110994 GAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT-GCGTA-GCGGCACAAAATAAATAC 111051
| |||| | |||||||| || |||||| || || || | | |||| |
Sbjct 483133 GCACATTAAGTAATCTGGCTTCAGACGAGTCAAATGGCATACGCAGTTTCATATAAGT-- 483076
Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111
||| || | ||||| || || | | | || ||||||||| || ||||||| | | |||
Sbjct 483075 ATCTGCCAATCCTTGGACTCCGACAGCTATGGGTCTGTGTTTCACATTAGACCTCCTCGC 483016
Query 111112 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171
|| || |||||||| ||| |||| |||| ||| |||||| | | || | ||
Sbjct 483015 AGATTCGACGGGATAGTCATTGATGTCTATGATCTTGTTCAGATTTCTAGCGACTACTTT 482956
Query 111172 TGTGATTTCATGAAGTTTTTCATAATCA----AAAGTGCGA----GT-CTCTTCATTG-- 111220
| | ||||||||| |||||| | ||| | | | | || ||| || | |
Sbjct 482955 GGCAACTTCATGAAGCTTTTCAAAGTCATACCATACCTCAACATCGTCCTCGTCGTAGTG 482896
Query 111221 -ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279
||| || |||| | || || || || | ||| |||||||| |||||||| | |
Sbjct 482895 TACAAACGTTGGTAACGCTATAGAGGCGAGATTACAAACAGCGGTCTCATCAGGAGACGA 482836
Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339
|| | || ||||| ||||| || || || ||||| || || | ||| || |||||
Sbjct 482835 ATATTGTACTATTTCGGTACACAAATTTGACGATTTAATTGTGCCAAGATTATTCTGGTT 482776
Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399
|||| |||||| ||||| || || ||||| | || | || ||||| ||||||
Sbjct 482775 TGACTTCCGGTTGCATGCATCTTTATATAGCATAAATGGATTACCAGTCTCGATCTGTGC 482716
Query 111400 TTTGAGAATAGCCTTCCAAA 111419
|| || || || |||||
Sbjct 482715 TTCTAGTATCGCAAACCAAA 482696
>seq43
Length=391780
Score = 104 bits (114), Expect = 3e-17
Identities = 255/380 (67%), Gaps = 10/380 (3%)
Strand=Plus/Plus
Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541
|||||||||||| | ||||||| | || | || || | | ||| | ||||
Sbjct 81739 ATCAAGGATATCAGGTCTATTAGTGCCTGCTAGCACGACGACATGATCATCAGAGGCAAA 81798
Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCT--GGC 11599
|||||||| || ||| | |||||||| || |||||| ||||| | | | |
Sbjct 81799 ACCATCCATTTCAACGAGAATTTGATTAAGAGTAGCTTCTCTTTCATCGTGACCACCGCC 81858
Query 11600 ATA----CCACCAGCACTGCGTTGCT-TGCCCACCGCATCAATCTCATCAATGAAGACAA 11654
| | ||||| ||| || ||| | || | ||||||||||||||||| || ||||
Sbjct 81859 AAAAGAACCACCTTGACTACGA-GCTCTTCCAATAGCATCAATCTCATCAATAAATACAA 81917
Query 11655 TACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACAC 11714
||| || | | || || | |||| ||||| | |||| | ||||| ||||
Sbjct 81918 TACTAGGAGCCTCCTTACGAGCTGTAGCAAATAGATCTCTCACCCGGCTAGCACCAACAC 81977
Query 11715 CAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCA 11773
|||||||||||||||| || | | | |||| || | || ||||| ||| || |||
Sbjct 81978 CAACAAACATCTCCACGAATTCCGAGCCAGA-TACAGAGAAAAATGGTACACCTGCCTCA 82036
Query 11774 CCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCG 11833
|| || ||||| || || | ||||| || ||||| || ||| | |||| ||
Sbjct 82037 CCAGCTGTGGCTTTAGCAAGTAAAGTCTTACCAGTACCAGGAGGACCAGAAAGAACAGCA 82096
Query 11834 CCTCGGGGGATCTTGGCACC 11853
||||| ||||||||||||||
Sbjct 82097 CCTCGAGGGATCTTGGCACC 82116
>seq78
Length=1347436
Score = 100 bits (110), Expect = 4e-16
Identities = 147/204 (72%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|| ||||| || ||||| | ||||| ||||| | ||| ||||| ||||| ||||||
Sbjct 284568 CCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGCATAAGACCACGCTTC 284627
Query 122737 TTCAACCAATAAATA-GCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795
||||||||| | ||| ||| ||||| || ||||||||||||||||| ||| || ||
Sbjct 284628 TTCAACCAAAAGATACTAGCA-AATGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAA 284686
Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA---AACCATTTCATTGCCCA 122852
|||| || || || || |||| ||| | ||||| | ||| | | |||||
Sbjct 284687 AGCAACGAGACGCTCAGCAAAGG---TAGATTGATCATCAGAGATCCAAGTTAGGGCCCA 284743
Query 122853 TTTCGCCTTCTTCTCAATACATGG 122876
| |||||||||| |||||| ||
Sbjct 284744 GTCAGCCTTCTTCTTAATACAAGG 284767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030696833600
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