Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq79 156 5e-33 seq78 122 1e-22 >seq79 Length=299291 Score = 156 bits (172), Expect = 5e-33 Identities = 602/931 (65%), Gaps = 15/931 (2%) Strand=Plus/Minus Query 118703 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 118762 |||||||| | || |||| ||||| |||| || || | || |||||| | Sbjct 119027 AGGAAGGGACAAAGAAGCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGAC 118968 Query 118763 AATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 118822 |||||| ||||||||| ||| || || || |||| ||| | |||||| ||| | Sbjct 118967 AATTTCACAGCACAAGTTGGAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGCT 118908 Query 118823 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 118882 |||||| ||||||||||| |||||| | || | || ||||| ||||||| || || || Sbjct 118907 GTTACAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGAT 118848 Query 118883 AGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACT 118941 ||| | ||||| | || | ||| | ||| | || || |||| || |||| Sbjct 118847 AGCATACCAGAGCTTCTG-AGCCTTGATAGTTCTTCTACCTTTGCCTTCTTTTTCATACT 118789 Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001 || |||||||| |||| || || || | |||| | || || || || | Sbjct 118788 TTTCATAGAGGGCAACAAATTCGTCTCCATAGACCTCGTCCAAACCAGGACACTCATTAG 118729 Query 119002 GGCAGAAGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059 |||| | | || ||| | || | | ||| || | ||||||||| | ||| ||||| Sbjct 118728 GGCACATCAAAGTCCAAT--CCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGAT 118671 Query 119060 CCAGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA 119118 ||| || ||| |||| | ||| | | || || ||||||| | || || || |||| Sbjct 118670 CCAAAGGGCCAAGAACAAATCTCTGGCA-CGGACTTCTTCCTTACCGTGGTTCTTTCGCA 118612 Query 119119 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCC 119177 | || | || || | | ||| ||||||| || |||| ||||| |||| | ||| Sbjct 118611 AGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCACCTG 118552 Query 119178 TTACGACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTG 119235 | | |||| | |||| ||||| || |||||| ||| || || | | ||| | Sbjct 118551 GTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTTGTTGAAAACTCTCAACATAG 118492 Query 119236 GAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACAT 119295 | | ||||| | || || || || || |||| || | |||| | || || Sbjct 118491 GGACAATACCGTTAGAAGTACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGATAT 118432 Query 119296 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 119355 |||||| || ||||||||| ||||| |||| ||||| || || | | | | Sbjct 118431 TGTGGATACTCAAACCAATACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAAAG 118372 Query 119356 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415 | | ||||| || || || |||||| |||| | | | ||| || |||||||| Sbjct 118371 TATCATAGATACCCTCAATGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACATTT 118312 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC-CTTGG 119474 | ||| |||| |||||||| ||| | | ||| || | || | || || ||| ||| Sbjct 118311 GTGGCTTGGGAGTACCAGCATTGTACAAAGTAGGAGAAGCAT-GAGTAAAGTACTTTTGT 118253 Query 119475 GACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAG 119534 ||||| | | ||| || || | | | || |||||| | || || ||||| | | Sbjct 118252 GACATGTAATTGTAAGTTTCAATGGCCTTGGCAATGTCCGCGCCATGGATACCAACAGCT 118193 Query 119535 ACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA 119594 || | ||| | ||| | ||| ||| | || | | || | || | | | | |||| Sbjct 118192 ACTCTCATGATCATATGTTGAGGTCTCTCAGCAATTTTTCCGTTGATCTTGAGCAAGTAA 118133 Query 119595 -CTCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 |||| ||||||||||||| ||| || ||| Sbjct 118132 GATCTT-TCCAAGGTCTTGAAACCGAAGTAG 118103 >seq78 Length=1347436 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 || || ||||| || || | ||||| ||||| || ||| ||||| ||||| |||||| Sbjct 284568 CCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGCATAAGACCACGCTTC 284627 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||||||| || || | |||||| |||||||||||||| ||||| ||| ||||| Sbjct 284628 TTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAAA 284687 Query 130154 GCAAAGAGACGCTCAGCAAAGG 130175 |||| ||||||||||||||||| Sbjct 284688 GCAACGAGACGCTCAGCAAAGG 284709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433916746960