Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq79 192 7e-44
seq78 111 2e-19
seq155 95.1 1e-14
seq43 91.5 2e-13
>seq79
Length=299291
Score = 192 bits (212), Expect = 7e-44
Identities = 1095/1735 (63%), Gaps = 37/1735 (2%)
Strand=Plus/Plus
Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290
||| ||||| | || || | ||||| ||||| | ||||||| | | | || ||
Sbjct 118179 ATGATCATGAGAGTAGCTGTTGGTATCCATGGCGCGGACATTGCCAAGGCCATTGAAACT 118238
Query 104291 TACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349
||| | | ||||| ||| ||| || | ||| || | || || | | |||||||||
Sbjct 118239 TACAATTACATGTCACAAAAGTACTTT-ACTCATGCTTCTCCTACTTTGTACAATGCTGG 118297
Query 104350 TACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 104409
||| || | || |||||||| ||| ||| | | || ||||| ||||| || |
Sbjct 118298 TACTCCCAAGCCACAAATGTCGTCTTGTTTCTTGGTAAACATGAAGGATGACTCCATTGA 118357
Query 104410 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 104469
|||||||||| ||| | | | ||||| ||||| |||| || || ||||||||
Sbjct 118358 GGGTATCTATGATACTTTGAAGACCTGTGCCTTGATCTCGAAGTCTGCAGGTGGTATTGG 118417
Query 104470 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATC 104529
|| ||||| || | | |||| | || |||| || || || ||| ||
Sbjct 118418 TTTGAGTATCCACAATATCCGTGCCACTGGTTCCTATATTGCCGGTACTAACGGTACTTC 118477
Query 104530 AGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGC 104589
| |||||| | || ||| | | || || ||| ||| || | ||||| | ||||
Sbjct 118478 TAACGGTATTGTCCCTATGTTGAGAGTTTTCAACAACACTGCTAGATATGTTGACCAAGG 118537
Query 104590 TGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 104645
| || | | || || || |||| | || | ||||| ||||||| ||| |
Sbjct 118538 T-GGTAACAAGAGACCAGGTGCTTTCGCCATGTACTTGGAGCCTTGGCACGACGATGTTT 118596
Query 104646 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTC 104704
| || ||| | || ||||| ||||| ||| | || || | | ||||| | ||| |
Sbjct 118597 TTGAATTCATCGACTTGCGAAAGAACCACGGTAAGGAAGAAG-TCCGTGCCAGAGATTTG 118655
Query 104705 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 104764
|||| || || ||||| || || | |||||||||||||| ||| | | |||||
Sbjct 118656 TTCTTGGCCCTTTGGATCCCCGACTTGTTCATGAAGAGAGTCAAGGCTAACGAGGATTGG 118715
Query 104765 TCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 104824
|| | | || || | || |||||| | ||| | | || || || ||||
Sbjct 118716 ACTTTGATGTGCCCTAATGAGTGTCCTGGTTTGGACGAGGTCTATGGAGACGAATTTGTT 118775
Query 104825 GCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGAT 104884
||||| || |||||| || ||||||| | | || | | || | ||
Sbjct 118776 GCCCTCTATGAAAAGTATGAAAAAGAAGGCAAAGGTAGAAGAACTAT-CAAGGCTCAGAA 118834
Query 104885 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAA 104943
| | ||| | ||||| || || | ||||| |||||||||| || | |||||| |||||
Sbjct 118835 GCTCTGGTATGCTATCCTTGAGGCCCAAACTGAGACTGGTAACCCCTTCATGCTCTACAA 118894
Query 104944 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCT 105003
|| || |||||| |||||||||||| | || ||||| ||||| |||||| |
Sbjct 118895 GGATGCTTGTAACAGCAAGAGTAATCAACAAAACCTGGGTACTATCAAATCTTCCAACTT 118954
Query 105004 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 105063
|| ||||| | || | | || || |||||| |||||| | || ||
Sbjct 118955 GTGCTGTGAAATTGTCGAGTACTCTTCTCCTGAAGAAGTGGCTGTTTGTAACTTGGCTTC 119014
Query 105064 AATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATGAAAA 105117
| | || || | ||| || || || ||| | | || | | ||| ||
Sbjct 119015 TTTGTCCCTTCCTGCTTTTGTTGAAAGTGATGATGAAGGCTTATGGTACAACTTTGAGAA 119074
Query 105118 ACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTT 105177
|||||||||||| | || | || || | |||| | || ||||||| ||||| ||
Sbjct 119075 GCTCCACGAAGTTGCCAAGGCCGTTACTAGAAACTTGAATGTCATTATTGACAGAAACTT 119134
Query 105178 TTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 105237
|| || || || ||| | | ||| | | ||| | || |||| ||| || |
Sbjct 119135 CTATCCAGTAAAGGAGGCTGAGAGAAGTAACTTCCGTCACAGACCTATTGCTCTTGGCAT 119194
Query 105238 TCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTCCGACGAAGC 105294
||| ||| | || |||| ||||| ||| || | |||| || || |||||
Sbjct 119195 TCAAGGTTTAGCTGATGCTTTCATGGCTCTCCGTTTGC---CATTCGACTCTCCTGAAGC 119251
Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354
||| || | || | || | ||| ||||| || || || ||| | || | |||
Sbjct 119252 CAAGCAATTGAACATTCAAATCTCTGAAACCATTTACCATGCTGCTGTAGAATC---TTC 119308
Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411
| || | || ||| |||| | || || |||| |||||| ||||| ||||| |
Sbjct 119309 AATTGAACTTGCTGAGAAATATGGCGCCTACGAGACCTATGAGGGATCTCCTGCTTCTAA 119368
Query 105412 AGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGC 105471
|| | | |||| || |||||||| | | ||| || | || |||| |
Sbjct 119369 GGGTCTTTTACAATACGACATGTGGGATGTTACTCCCACTGATCTATGGGATTGGGCTAC 119428
Query 105472 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCC 105531
||| ||| | || || | |||||| | ||| ||| ||| | ||||| |||||
Sbjct 119429 TCTTAAGAAGAAGATGGCTAAGCACGGTCTTAGAAACTCTCTTCTCGTTGCTCCTATGCC 119488
Query 105532 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 105591
|| || || ||| | |||||| | ||||| |||||||| ||||| || ||||| | ||
Sbjct 119489 TACTGCTTCGACCTCCCAAATCCTCGGTAACAATGAATGTTTTGAGCCTTACACATCCAA 119548
Query 105592 CATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGG 105650
|||||| ||| | ||| ||| || |||||||| |||||||||| | | ||
Sbjct 119549 CATCTACTCT-CGTAGAGTCCTTGCTGGAGAGTTCCAGATTGTCAACCAATGGTTGTTGA 119607
Query 105651 ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCATGGTGAAAG 105707
| || || || | || | ||| | | |||||| | |||| || ||
Sbjct 119608 AGGATCTTGTCGACTTGGGATTGTGGGGTGAAAACATGAAGAACAGAATCAT--TGCTAG 119665
Query 105708 CGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCA 105767
| |||||| |||||||| || | ||||| |||| || ||| || ||| |
Sbjct 119666 C-AATGGTTCTATTCAAAACATCCCTAACATTCCTGATGACATCAAGGCTTTATACAAGA 119724
Query 105768 CAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 105827
| |||||||| || ||| ||||||| ||||| || || |||| | | |
Sbjct 119725 CTGTTTGGGAGCTCTCTCAAAAGACAATCATTGATATGGCTGCTGACCGTGCTGCATATA 119784
Query 105828 TTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 105887
|||||||||||||| | |||| ||| || || ||| || ||| |||| | |
Sbjct 119785 TTGATCAAAGTCAATCTTTGAACATCTATATCCAAGCTCCTACTATGGGCAAGTTGACCA 119844
Query 105888 CTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942
|||||| | || | ||| | ||||||||||| || || ||||| ||||| ||
Sbjct 119845 GTATGCATTTCTATGGATGGCAAAAGGGTCTCAAGACAGGTATGTACTACCTGCG 119899
>seq78
Length=1347436
Score = 111 bits (122), Expect = 2e-19
Identities = 340/510 (67%), Gaps = 23/510 (5%)
Strand=Plus/Minus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGG-AAGAC--TCTAAAT 94497
||||||||||||||| | ||||| ||||||| | || ||| || || ||| |||
Sbjct 285067 TGGACTGCTGAAGAGATTGATCTTGGAAAGGATATTAGTGACTGGGAACACCGTCTTAAT 285008
Query 94498 GAAAATGAAAAGAAATTCATAAAATACA---TCCTGGCATTCTTTGCTGGATCCGATGGA 94554
|| |||| || |||| | | | | || || |||||||||| ||||||||
Sbjct 285007 GATGATGA---GAGATTCTTTATCTCTCGTGTGCTCGCTTTCTTTGCTGCCTCCGATGGT 284951
Query 94555 ATTGTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAG 94613
||||| |||||| | | | | || ||| |||||| || || | |||| || |
Sbjct 284950 ATTGTCAATGAGAACCTTGTTGAGAGATTCTCTGGTGAGGTCCAGATTC-CTGAGGCCAA 284892
Query 94614 ATCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAAC 94672
| ||||| | | || |||| ||| | | | |||| ||||| ||| ||
Sbjct 284891 GTGTTTCTACGGATTCCAAA-TCATGATGGAGAATATCCATGCTGAGACTTACTCCTTAC 284833
Query 94673 TCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCA-A 94731
| || || | ||||| ||||||| | ||| || | || | || || | |
Sbjct 284832 TTATTGATACTTATATCAAGGATGCTAAGGAGGCTAACTTCTTGTTCCATGCTATTGATA 284773
Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAG 94788
||| |||| |||||| | ||||| || || ||||| | | ||| | |||| |
Sbjct 284772 ACA-TTCCTTGTATTAAGAAGAAGGCTGACTGGGCCCTAACTTGGATCTCTGATGATCAA 284714
Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848
|| | ||||||||||||| ||| | || || || ||| ||||||||||||||||||
Sbjct 284713 TC---TACCTTTGCTGAGCGTCTCGTTGCTTTCGCTGCTGTCGAGGGTATCTTCTTCTCT 284657
Query 94849 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907
||||| || ||| ||| | |||| | |||||||| ||||| ||||| ||| | ||
Sbjct 284656 GGTTCATT-TGCTAGTATCTTTTGGTTGAAGAAGCGTGGTCTTATGCCTGGTTTGACTTT 284598
Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGG 94937
||| || ||| | || |||||||| || ||
Sbjct 284597 CTCTAATGAGTTGATTTCTCGTGATGAAGG 284568
>seq155
Length=566151
Score = 95.1 bits (104), Expect = 1e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 105797 ATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTC 105856
|| || |||||||| || || ||||| | |||||| || ||||||||||||| | |||
Sbjct 483628 ATCGATATGGCCGCCGACCGCGGTCGATACATTGACCAGTCTCAAAGTATGAATATTTTC 483687
Query 105857 ATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGT 105916
||| ||| ||| || | ||| || || |||||| | ||| | |||||||||||
Sbjct 483688 ATGAAAAATCCCACTACTGGCAAACTTACTAGTATGCATTTCTACGGCTGGAAGAAGGGA 483747
Query 105917 CTCAAAACGGGGATGTATTA 105936
||||| || || ||||||||
Sbjct 483748 CTCAAGACAGGAATGTATTA 483767
>seq43
Length=391780
Score = 91.5 bits (100), Expect = 2e-13
Identities = 331/507 (65%), Gaps = 16/507 (3%)
Strand=Plus/Plus
Query 9523 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9582
||| || || | ||| || || | | ||| | ||||||||||||| | ||| || |
Sbjct 81706 ACGGTCGAATCTACCAGGTCGCAATAACGCCTTATCAAGGATATCAGGTCTATTAGTGCC 81765
Query 9583 GGCGATGACAACAATACCTGTT--TCATTATCAAAACCATCCATCTCTGTCAAAAGTTGG 9640
|| | || || | | || | ||| ||||||||||||| || | || |||
Sbjct 81766 TGCTAGCACGACGACA--TGATCATCAGAGGCAAAACCATCCATTTCAACGAGAATTTGA 81823
Query 9641 TTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATA----CCACCAGCACTGCGTTGC 9694
|||| ||| ||| | |||||| | | | | || | ||||| ||| || ||
Sbjct 81824 TTAAGAGTAGCTTCTCTTTCATCGTGACCACCGCCAAAAGAACCACCTTGACTACGA-GC 81882
Query 9695 T-TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753
| |||| | ||||||||||||||||| || || || | || | | |||||
Sbjct 81883 TCTTCCAATAGCATCAATCTCATCAATAAATACAATACTAGGAGCCTCCTTACGAGCTGT 81942
Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813
|||| ||||| | || || | || || |||||||||||||||||||| || | |
Sbjct 81943 AGCAAATAGATCTCTCACCCGGCTAGCACCAACACCAACAAACATCTCCACGAATTCCGA 82002
Query 9814 GGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872
| | || ||| || || || ||| | ||||| || ||||| || || | ||
Sbjct 82003 GCCAGATACA-GAGAAAAATGGTACACCTGCCTCACCAGCTGTGGCTTTAGCAAGTAAAG 82061
Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACTT 9931
||||||| ||||| || ||| | || | |||||||| || |||||||| || | ||
Sbjct 82062 TCTTACCAGTACCAGGAGGACCAGAAAGAACAGCACCTCGAGGGATCTTGGCACCTAATT 82121
Query 9932 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCG 9991
| |||| | |||| | ||||| ||| |||| || | ||| ||||| ||
Sbjct 82122 TC-TCGTATTTAGCAGGCTCTTTAAGGAAACTAACAAACTCCATGATTTCCTCTTTAGCC 82180
Query 9992 GCGTCAATCCCCTCAACATCGGTAAAC 10018
||||| || ||||||||| ||||
Sbjct 82181 TCGTCAGCGCCAGCAACATCGGAAAAC 82207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259589733840
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