Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq87 87.8 1e-12
>seq87
Length=222757
Score = 87.8 bits (96), Expect = 1e-12
Identities = 265/404 (66%), Gaps = 19/404 (5%)
Strand=Plus/Plus
Query 111729 ATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTG 111788
||| || || |||||||| || |||||| || || | | ||| | ||| | ||
Sbjct 40475 ATAGACGTGAGCATCTCCCATTGTATGGATGAAATCGCCACACTCTATTCCACATACTTG 40534
Query 111789 TGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCAT 111848
|| ||||| | ||| || | ||| ||| || || || || ||||| | ||||||
Sbjct 40535 AGCGATCATCTTTGTTAGCAACGCGTAGGAAGCGATATTGAAGGGGACACCCAAGCCCAT 40594
Query 111849 ATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTT-TG---TGAC--------AC 111896
|| | |||||| || || || || || || | ||| || | || ||
Sbjct 40595 GTCACAACTTCTTTGGTACAGTTGGCAGGAGAGCTCTTTTCTGCCATTACGAAAGCTAAC 40654
Query 111897 ATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATCCCATTCATAA----AGGGTC 111952
|||||| ||| | | ||||||||| || || | ||||| |||||||| |||||
Sbjct 40655 ATAAAACTGAGAGAATACATGACAGGGTGGTAGAGCCATATCATTCATATCGGCAGGGTT 40714
Query 111953 CCCATGCACACATGATCATCCTTCTGCTGTAGCGATTATGTTCAATGTCGTGTATGACAT 112012
|| |||| ||||||| ||||||| || || | | || || | | || ||||
Sbjct 40715 CC-ATGCCGACATGATAATCCTTCGATCATATGGAGTCTCTTTGATTTTTCGAATCACAT 40773
Query 112013 TCAAGAGCTGGTCTA-TCCCTTTACCAGTATAATCCGCCTGACATCCAGTGTATGTTGCC 112071
||||| || | ||||||| ||||||||||| | | ||| | ||| | ||
Sbjct 40774 CTGCCAGCTGATCCACTCCCTTT-CCAGTATAATCTGTATCACAGTCTTCATATTTGGCA 40832
Query 112072 CCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCC 112115
||| | || | |||||| |||||||| | ||| || ||||||||
Sbjct 40833 CCAAAATGACGCCATTGAAATCCATAGACAGGTCCTAGATCTCC 40876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391944807045058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |