Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq87 131 1e-25
>seq87
Length=222757
Score = 131 bits (144), Expect = 1e-25
Identities = 462/709 (65%), Gaps = 22/709 (3%)
Strand=Plus/Plus
Query 118357 TTGTAGTTTTCCAAAATAAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATC-CTT 118415
||||| ||| | ||||||||||||| | |||| || || |||| | | | ||| |||
Sbjct 40344 TTGTATCCTTCAACAATAAAATCTTCATATCTAAAATCGTCAATATCTGTTACATCTCTT 40403
Query 118416 GTTTATGGATAGTGTGGGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTC 118475
| | | || |||||||| ||| | || || ||||| | | |||| ||
Sbjct 40404 GCAAAACG-TAAAGTGGGAAAGTTTGTAGGTGTTCGTGCGATTTGGACTCTAAGTGCGTC 40462
Query 118476 AATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCA-GGTGTAA 118534
|| || | |||||| |||||||| || |||||||| ||||| || ||| | ||
Sbjct 40463 AACATGGTCAGCATAGACGTGAGCATCTCCCATTGTATGGATGAAATCGCCACACTCTAT 40522
Query 118535 GCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAA 118594
|| | | ||||| ||||| | ||| | ||| |||| || | ||| || || |
Sbjct 40523 TCCACAT-ACTTGAGCGATCATCTTTGTTAGCAACGCGTAGGAAGCGATATTGAAGGGGA 40581
Query 118595 CACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTC-------CC-- 118645
|||||| |||||||| ||| ||||||| |||||| |||||||| ||
Sbjct 40582 CACCCAAGCCCATGTCACAACTTCTTTGGTACAGTTGGCAGGAGAGCTCTTTTCTGCCAT 40641
Query 118646 --CGTTTGC-AACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCA 118702
|| || ||||||||||||| | | ||||| || || ||| |||| | |||
Sbjct 40642 TACGAAAGCTAACATAAAACTGAGAGAATACATGACAGGGTGGTAGAGCCATATCATTCA 40701
Query 118703 GTTGGGCAGGATTCCAGGCTGTTAAAACATGCCTTCTGCTATATGG-TTCTACCTGTATA 118761
| |||||| ||||| || | | | | ||||| |||||| ||| || |
Sbjct 40702 TATCGGCAGGGTTCCATGCCGACATGATAATCCTTCGATCATATGGAGTCT--CTTTGAT 40759
Query 118762 CCCTCAATTAAATTCTG-AATCTGATCCACACCCTTTCCAGTATACTGAGACTCGCATCC 118820
|| | | | |||| | ||||||||| |||||||||||||| | | || || |
Sbjct 40760 TTTTCGAATCACATCTGCCAGCTGATCCACTCCCTTTCCAGTATAATCTGTATCACAGTC 40819
Query 118821 TTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCCCTG 118880
|| ||||| || |||||| | ||||||||| ||||| ||||| || |||||||| |
Sbjct 40820 TTCATATTTGGCACCAAAATGACGCCATTGAAATCCATAGACAGGTCCTAGATCTCCTTC 40879
Query 118881 GGACCTAAAATCTAAACCTACTTTTCTCT-GAAATTCTTTTGACCCATTAGCATTCCAAA 118939
| ||| | || ||| | ||| ||| |||| ||| | ||||| ||| ||| |
Sbjct 40880 GCGTCTATGCTGTAGTCCT-CGTTTATCTAGAAACTCTCTGCTTCCATTTCCATCCCATA 40938
Query 118940 TAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAA 118999
| ||| ||| | | | || || || | ||||| || ||| |||||| | |
Sbjct 40939 TGTGAACGCCTCTATCCGAGAGTAATTTGGAATCGGTAGAGCCCTTTACAAACCATAACA 40998
Query 119000 GCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGG 119048
|||| || | || ||| | | ||||| |||| || || || || ||
Sbjct 40999 GCTCTTCTAAGACACCTTTAAAGTAAACTCTTTTCGTAGTTAATAGAGG 41047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414475961461624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |