Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq78 190 2e-43
>seq78
Length=1347436
Score = 190 bits (210), Expect = 2e-43
Identities = 592/906 (65%), Gaps = 29/906 (3%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
||||| ||||||||| || || |||| ||| |||||||||||||| || || |
Sbjct 284247 ACACCTGCTTTTTGGTAGTCAGAGACTCTCTTCTCGAAGAAATTAGTCTTACCAGAGAGA 284306
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA----ATGTTTTTCACACTT 4363
|| || || ||||| ||||| || |||||||| || ||||| |||| || ||
Sbjct 284307 GAGATGTTCTCCATGAAATCGAAGGGATTAGTAGCATTGTAGACCTTGTTGTTTCCA--- 284363
Query 4364 TAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAG-TTCGCAGT 4422
|| | | | |||| |||||| ||||| || || || || | |||||| || ||| |
Sbjct 284364 -AGGGAAAGCAATAATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCA-T 284421
Query 4423 TAATTCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACG 4481
| ||||||| | || ||| || | || | ||||| || || | ||| ||| ||
Sbjct 284422 TCATTCCAAGAAGACT-ACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACA 284480
Query 4482 GCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAAC 4541
||||| || || || | || | | || ||| | || || | || |||||
Sbjct 284481 GCTTCAGTAATAATCTTTTCAACAACAGACTTCTTAGGTCTGTTGACAAGGTGGCCAAAA 284540
Query 4542 AATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAAC 4601
| ||||| || |||||| |||| ||||| || | ||||| || ||||| ||
Sbjct 284541 AGCAAACAAGCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAA 284600
Query 4602 GTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAA 4661
|| || || ||||| | ||| | ||| || | |||||| ||| |||||||| |||||
Sbjct 284601 GTCAAACCAGGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAG 284660
Query 4662 AAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG 4721
||||| || || || || || || || || || | || | | || | | ||
Sbjct 284661 AAGAAGATACCCTCGACAGCAGCGAAAGCAACGAGACG---CTCAGCAAAGGTAGATTGA 284717
Query 4722 TCTTTA---ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT 4778
|| | | ||||| ||| ||||||| ||| || ||||||| || ||||| | |
Sbjct 284718 TCATCAGAGATCCAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCA 284777
Query 4779 ATAGCGTTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAG 4834
||||| | || || || | | || || |||| |||||||| || || ||
Sbjct 284778 ATAGCATGGAACAAGAAGTTAGCCTCCTTAGCAT---CCTTG-ATATAAGTATCAATAAG 284833
Query 4835 TAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCT 4894
|| | || | |||| ||| ||||| || || || || |||||||| || || |
Sbjct 284834 TAAGGAGTAAGTCTCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTT 284893
Query 4895 AGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954
|| || | | || || || | | ||||| || || | ||| || || || |||||
Sbjct 284894 GGCCTCAGGAATCTGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACC 284953
Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA- 5013
|| ||| ||||| || || | ||| |||| |||||| | || ||| ||||
Sbjct 284954 ATCGGAGGCAGCAAAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAG 285013
Query 5014 --GTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGA 5071
| | || ||||| | ||| || | ||||| |||||| ||||||| || ||
Sbjct 285014 ACGGTGTTCCCAGTCACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAAGA 285073
Query 5072 CGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
|| || |||| |||||||| ||| || ||| | |||| || || | | ||||||
Sbjct 285074 GGCCTCAGCTTGCTTGTACATTTGCCAGATCTCATGGTACTTGATAGGGAACAAGACAAA 285133
Query 5132 TCTGTT 5137
||||||
Sbjct 285134 TCTGTT 285139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048736025278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |