Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq32 140 7e-28
seq111 125 2e-23
seq90 102 2e-16
>seq32
Length=396137
Score = 140 bits (154), Expect = 7e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || ||||||||||| ||||| |||||||| || | | |||||| |||||
Sbjct 381222 AGGACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGCCATCC 381281
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || |||||||| || || ||||| | | || || ||||| ||
Sbjct 381282 TCGAGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCC 381341
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| | || | | |||| ||| ||||||||| ||||| |||||
Sbjct 381342 TGAATCTTGGTCTTAACATTATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTC 381401
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||||||||| ||||||| |||||
Sbjct 381402 TTACCAGTGAGAGTCTTGACGAAGATTTGCAT 381433
Score = 118 bits (130), Expect = 2e-21
Identities = 158/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || ||||| || |||||||||||||||||||| | | ||| |
Sbjct 381671 GAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACG 381730
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || || ||||| || | | ||| ||||| | | || |||||
Sbjct 381731 ACCGTCTTCCAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTC 381790
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || ||||| | || | | |||| ||| ||| || ||||||||
Sbjct 381791 CTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGT 381850
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || || ||||| ||||||| ||||||
Sbjct 381851 GATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCATT 381890
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || |||||||||||||| |||||||||||||| || | | ||| | |||||
Sbjct 381450 AGGACGAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCC 381509
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || || || ||||| | | || || ||||| |||
Sbjct 381510 TCGAGTTGCTTGCCAGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCT 381569
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | || ||| || || ||||| ||||||||
Sbjct 381570 TGGATCTTGGTCTTGACATTGTCAATAGTATCAGAAGATTCGACCTCAAGGGTAATAGTC 381629
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | ||||| ||||||| |||||
Sbjct 381630 TTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 381661
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | || ||||| ||||| |||||||||||||| |||| | ||||| |||||
Sbjct 380766 AGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCC 380825
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||| || | | ||| ||||| | | || || ||||| |||
Sbjct 380826 TCAAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 380885
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || | || | | |||| ||| ||| || ||||| || || ||
Sbjct 380886 TGGATCTTGGTCTTAACGTTGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTC 380945
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| ||||||| |||||
Sbjct 380946 TTACCAGTGAGGGTCTTGACGAAGATTTGCAT 380977
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || ||||| || ||||||||||| || | | |||||
Sbjct 380531 GAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCT 380590
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| | || || ||||||||||| | || ||||| | | || || ||
Sbjct 380591 GCCGTCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTC 380650
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || ||||| | || | | |||| ||| ||| || || || ||
Sbjct 380651 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGT 380710
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || |||||||| || |||| |||||
Sbjct 380711 GATGGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || ||||| || |||||||||||||||||||| | | ||| |
Sbjct 380987 GAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACG 381046
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || ||||| || | | ||| ||||| | | || || ||
Sbjct 381047 GCCATCCTCGAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTC 381106
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || || ||| | || | | |||| ||| || ||||| |||||
Sbjct 381107 CTTGTCTTGGATCTTGGTCTTAACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGT 381166
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || | ||||| ||||||| |||||
Sbjct 381167 GATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 381205
>seq111
Length=751517
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| |||||||||||||| |||||||||||||| || | | ||||| |||||
Sbjct 299242 GAGGACAAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTGCCATC 299183
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || || ||||||||||| | || || || | | ||||||||||| ||
Sbjct 299182 TTCGAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGGGGAATTCCTTCCTTGTC 299123
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | | |||| ||| ||| || || || || || ||
Sbjct 299122 CTGGATCTTGGTCTTGACATTGTCAATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGT 299063
Query 152072 TTTGCCCGTGAGAGTCTTCACGAA 152095
|| || || || ||||| |||||
Sbjct 299062 CTTACCAGTAAGGGTCTTGACGAA 299039
>seq90
Length=207308
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || ||||||||||| ||||||||||||||||| | | ||| |
Sbjct 159071 GAGACGGAGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGAAAGAGTACG 159130
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || || || ||||| | | || || || | | ||||| ||
Sbjct 159131 ACCGTCCTCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGGAATTCCCTC 159190
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || |||||| | || | | |||| ||| ||| || || || ||
Sbjct 159191 CTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGT 159250
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || ||||| ||||| | |||||
Sbjct 159251 GATGGTCTTACCGGTAAGGGTCTTGACGAAAATTTGCAT 159289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818345967386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |