Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq32 223 7e-53
seq90 179 8e-40
seq111 143 6e-29
seq89 93.3 9e-14
seq74 93.3 9e-14
>seq32
Length=396137
Score = 223 bits (246), Expect = 7e-53
Identities = 186/228 (82%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | ||| |||||||||||||||||| ||||
Sbjct 380978 ACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGA 381037
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| ||||| || || || || |||||||| |||||||| ||
Sbjct 381038 AAGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGG 381097
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||||||||||||| | || || ||||||| ||||| |||| ||| ||
Sbjct 381098 AATACCCTCCTTGTCTTGGATCTTGGTCTTAACATTATCGATGGTGTCGGAAGATTCAAC 381157
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||||||| |||||||| ||||| ||||| ||||| || |||||
Sbjct 381158 TTCGAGAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 381205
Score = 183 bits (202), Expect = 6e-41
Identities = 178/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | ||| |||||||||||||||||| ||||
Sbjct 381662 ACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGA 381721
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || || || ||||| || || || || |||||||| |||||||| ||
Sbjct 381722 AAGAGTACGACCGTCTTCCAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGG 381781
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| ||||||||||| ||||| | || ||| | ||||| ||||| |||| |||||
Sbjct 381782 AATACCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGAC 381841
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| |||||||| |||||||| || | ||||| ||||| || ||||||
Sbjct 381842 CTCAAGAGTGATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCATT 381890
Score = 181 bits (200), Expect = 2e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| ||||| || | || | ||| || ||||||||||||||||| |
Sbjct 380750 ACCACCACGCAGACGAAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 380809
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | |||||||| ||||| || || || || |||||||| |||||||| ||
Sbjct 380810 AAGGGTTCTTCCATCCTCAAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGG 380869
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||||||||||||||| | || ||| | ||||| ||||| |||| |||||
Sbjct 380870 AATGCCCTCCTTGTCTTGGATCTTGGTCTTAACGTTGTCGATGGTGTCGGAAGACTCGAC 380929
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| |||||||| || | ||||| ||||| || |||||
Sbjct 380930 CTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 380977
Score = 181 bits (200), Expect = 2e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | || || ||||| |||||||||||||
Sbjct 381206 ACCACCACGGAGACGAAGGACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 381265
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | ||||||||| ||||| || || |||||||| | | ||||||||| ||
Sbjct 381266 AAGAGTTCTGCCATCCTCGAGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGGGG 381325
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||| || || ||||| | || || ||||||| ||||| |||| || ||
Sbjct 381326 AATACCCTCCTTATCCTGAATCTTGGTCTTAACATTATCGATGGTGTCAGAAGACTCTAC 381385
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||||||| |||||||| || | |||||| ||||| || |||||
Sbjct 381386 TTCGAGAGTGATAGTCTTACCAGTGAGAGTCTTGACGAAGATTTGCAT 381433
Score = 181 bits (200), Expect = 2e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | || || |||||||||||||||||||
Sbjct 381434 ACCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGA 381493
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| ||||| || || |||||||| | | ||||||||| ||
Sbjct 381494 GAGAGTACGGCCATCCTCGAGTTGCTTGCCAGCAAAGATGAGTCTTTGTTGGTCTGGGGG 381553
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||||||||||||| | || || | || ||||| || |||| ||||||
Sbjct 381554 AATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATAGTATCAGAAGATTCGAC 381613
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || ||||| || ||||| ||||| ||||| || |||||
Sbjct 381614 CTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 381661
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || |||| || | ||| || || ||||||||||||||||
Sbjct 380522 ACCGCCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 380581
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | ||| || || | || || || || ||||| | |||||||||||| ||
Sbjct 380582 GAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGG 380641
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||||||||||||||| | || ||| | ||||| ||||| |||| |||||
Sbjct 380642 AATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGAC 380701
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || || |||||
Sbjct 380702 CTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
>seq90
Length=207308
Score = 179 bits (198), Expect = 8e-40
Identities = 183/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | || || |||||||||||||| ||||
Sbjct 159062 ACCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGA 159121
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || ||||| ||||| || || |||||||||||||||||||| || ||
Sbjct 159122 AAGAGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGG 159181
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||||||||||||||| | || || | ||||| ||||| |||| || ||
Sbjct 159182 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCAAC 159241
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATACA 283110
||||| ||||| |||||||| || | ||||| ||||| || ||||| | | |||||
Sbjct 159242 CTCGAGGGTGATGGTCTTACCGGTAAGGGTCTTGACGAAAATTTGCATCGTTAAATACA 159300
>seq111
Length=751517
Score = 143 bits (158), Expect = 6e-29
Identities = 141/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||||||||||| ||| || | |||||| || ||||| || || || |||
Sbjct 299220 TCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTGCCATCTTCGAGTTGCTTACCAGCGAAG 299161
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | ||||||||| || ||||| || |||||||| |||||||| | || || |
Sbjct 299160 ATAAGACGTTGTTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACATTG 299101
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| |||| ||||| ||||| ||||| |||||||| || | ||||| |||
Sbjct 299100 TCAATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTACCAGTAAGGGTCTTGACG 299041
Query 283089 AA 283090
||
Sbjct 299040 AA 299039
>seq89
Length=907189
Score = 93.3 bits (102), Expect = 9e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| || || | |||||||| |||| || ||||| || || ||||| ||||||
Sbjct 537362 GTGGGGAAACCCTCGACTTGACCGTTGGCAATAGCTCTCATAAGAGTAGACTTACCAGCA 537421
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || || |||||||| || | ||| ||| | |||| |||
Sbjct 537422 CCGTTAGGACCACAGAGACCATATCGGCGGGCACGCTTAAGACGGAGTTGGGTACGGTTA 537481
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
|| | ||||| ||||||| || |||||||||||||| | ||||| |||||| ||
Sbjct 537482 AGCAAGATCTTGGCACCATAAGCAAGAGAGAACTCACAGTTACACAAGTCCTCACC 537537
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 315606 AACGGCCCAGTTTTCGACACACACGTTTTTAACAAATTCGCCACTGTGACTAATCACCAC 315665
|||||||||| ||| || || ||| || ||||| || ||| |||| | ||
Sbjct 535912 AACGGCCCAGACTTCTTCAGTCAAGTTCTTGGTGAATTCAGCAGAGTGTGTAATGATAAC 535971
Query 315666 CACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCAC 315725
|| |||||| ||| | ||| | |||| | || ||||||||| || | ||| |
Sbjct 535972 AACACCACCTTGGAATTCCTTGATAGCCTTGGACAAAGCACCGAGAGAGTCTCTGTCAAG 536031
Query 315726 AAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGCGGCGCCGAT 315785
| | ||||| || || ||||||||||| | ||| || ||||||| | || | |
Sbjct 536032 ATAATTGGTAGGTTCGTCAAGAACGATCAAGTGAGGACGTTGCCAAGTACAAGCAGCCAA 536091
Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAG 315835
|| ||||| | ||||| ||||| || || |||||||| ||||| ||||
Sbjct 536092 GACAAGCTTGACCTTTTGACCACCGGAAAGACCACGGATACGAGAGTGAG 536141
>seq74
Length=316158
Score = 93.3 bits (102), Expect = 9e-14
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| |||||||| | ||| | |||||| ||||| ||||| || || |||||||||
Sbjct 306803 GGGAAACCTTCCAATTTACCATCAGCAATCGATCTCATTAGTGTAGATTTACCAGCACCA 306862
Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAG-ATTAAAACGGGTGTTGTTCAG 317147
|| | |||||||| || || |||| |||||| || |||| || || || |||||
Sbjct 306863 TTACGACCGCAAAGGCCGTAACGATGTCCCTTGAATAGTCTTAAGAC-AGTTTTATTCAG 306921
Query 317148 AAGAATCTTACCACCATATGCCAGAGAGAA 317177
||| || | |||||||| || ||||| ||
Sbjct 306922 AAGCATTCTGCCACCATAGGCAAGAGAAAA 306951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046736973716564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |