Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq78 203 3e-47 >seq78 Length=1347436 Score = 203 bits (224), Expect = 3e-47 Identities = 577/876 (66%), Gaps = 23/876 (3%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263 ||| ||||| |||||| || || || | |||| ||||| ||||| |||||||| Sbjct 284243 CATGACACCTGCTTTTTGGTAGTCAGAGACTC-TCTTCTCGAAGAAATTAGTCTTACCAG 284301 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGC----TTTA 23319 | || || || ||||| ||||| || ||||||| || ||| || || ||| Sbjct 284302 AGAGAGAGATGTTCTCCATGAAATCGAAGGGATTAGTAGCATTGTAGACCTTGTTGTTTC 284361 Query 23320 CATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379 || | || | || | || || || ||||| ||||| ||||||||||| | | | Sbjct 284362 CAAGGGAAAGC----AATAATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTA 284417 Query 23380 TAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAA 23439 || || || | || | ||| | |||||| |||||| |||||||| Sbjct 284418 GCATTCATTCCAAGAAGACTACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCG 284477 Query 23440 ACAGCATCTTTAATTAT---TTGAACAATA-ACTTCTTCACTAGGTGGATATTTTAAATA 23495 ||||| || |||| || || ||||| | ||||||| | || || | | | Sbjct 284478 ACAGCTTCAGTAATAATCTTTTCAACAACAGACTTCTTAGGTCTGTTGACA----AGGTG 284533 Query 23496 CTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATT 23555 ||| | ||||| || |||||| || | ||||||||| | | |||||| ||||| Sbjct 284534 GCCAAAAAGCAAACAAGCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATT 284593 Query 23556 AGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGA 23615 ||| || || || || ||||| | || || || || | |||||| || ||||||||| Sbjct 284594 AGAGAAAGTCAAACCAGGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGA 284653 Query 23616 TCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675 || || ||||| |||||||| ||||| || || || || ||||| | |||| || | Sbjct 284654 ACCAGAGAAGAAGATACCCTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGA 284713 Query 23676 ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGT 23735 | || |||||| ||||| || | ||| | ||||||| || | ||| ||| | Sbjct 284714 TTGATCATCAGAGATCCAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTT 284773 Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTT-TCTTCATTATCTGTTATATATGTATCAATTA 23794 ||||| || | || | | ||||| || | | ||| | ||||| |||||||| | Sbjct 284774 ATCAATAGCATGGAACA-AGAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAA 284832 Query 23795 GTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATC 23854 |||| || | |||| ||| ||||| || || || || || || || ||||| Sbjct 284833 GTAAGGAGTAAGTCTCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACT 284892 Query 23855 TAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATAC 23914 | || |||| | || || ||| | | ||||| | | | | || || || ||||||| Sbjct 284893 TGGCCTCAGGAATCTGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATAC 284952 Query 23915 CATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTTGA 23972 |||| |||||||||||||| || ||| ||||| ||| |||||| || | Sbjct 284953 CATCGGAGGCAGCAAAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAA 285012 Query 23973 TA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAAC 24031 | | || ||| ||| ||||||| ||| | ||||| || ||| | ||||| ||| Sbjct 285013 GACGGTGTTCCCAGTCACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAAG 285072 Query 24032 TTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 ||| || |||| |||||| |||| || |||| Sbjct 285073 AGGCCTCAGCTTGCTTGTACATTTGCCAGATCTCAT 285108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521486917912400