Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq32 127 1e-24
seq90 123 2e-23
seq111 102 6e-17
>seq32
Length=396137
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| || ||||||||||||||||| | || || |||| |||
Sbjct 381681 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCC 381740
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || || ||||||||||| || |||| ||| | ||||||||| ||
Sbjct 381741 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 381800
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | || || ||||| | || || |||||
Sbjct 381801 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTA 381860
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || |||||||| |||||||||||||| |||
Sbjct 381861 CCAGTAAGGGTCTTTACGAAGATTTGCATTATG 381893
Score = 118 bits (130), Expect = 8e-22
Identities = 153/207 (74%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGTCCAGC 44191
||| || ||| |||||||||||||||||| |||| || || || | || || ||
Sbjct 380774 GTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAG--GGTTCTTCCATCCTCAAGT 380831
Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251
||||| || || || ||||||||||| || |||| || | || ||||| || |||
Sbjct 380832 TGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC 380891
Query 44252 TTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310
|| ||| || ||| | |||||||||| || || ||||| | || || ||||| ||
Sbjct 380892 TTGGTCTT-AACGTTGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTACC 380950
Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| ||||||||||||||
Sbjct 380951 AGTGAGGGTCTTGACGAAGATTTGCAT 380977
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| || ||||||||||||||||| | || || | || ||
Sbjct 380997 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCG 381056
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || || || ||||||||||| || |||| || | ||| ||||| ||
Sbjct 381057 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 381116
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| ||||| || || | || || |||||
Sbjct 381117 ATCTTGGTCTTAACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTA 381176
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | |||||| ||||||||||||||
Sbjct 381177 CCAGTCAAGGTCTTGACGAAGATTTGCAT 381205
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||||||||||||||| || | ||| || | || ||
Sbjct 381453 ACGAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCCTCG 381512
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||| | | || || |||| || | ||| ||||| ||
Sbjct 381513 AGTTGCTTGCCAGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 381572
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | || || || | ||||| ||||| | ||||| ||||
Sbjct 381573 ATCTTGGTCTTGACATTGT--CAATAGTATCAGAAGATTCGACCTCAAGGGTAATAGTCT 381630
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | |||||| ||||||||||||||
Sbjct 381631 TGCCAGTCAAGGTCTTGACGAAGATTTGCAT 381661
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186
|||| ||| || ||| |||||| ||||||||||| || | ||| || || |||| |
Sbjct 380541 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAG--GGTTCTGCCGTCTT 380598
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
||| |||||| || || ||||| | ||| || || |||| || | || ||||| ||
Sbjct 380599 CCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTT 380658
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | | |||||||| | || || ||||| | || || ||||
Sbjct 380659 GGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCT 380718
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || || ||||| || |||||||||||
Sbjct 380719 TGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 87.8 bits (96), Expect = 1e-12
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|| ||||| || || ||||||||| |||||||| || | ||||| || | || |
Sbjct 381225 ACGAGGTGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCT-GC-CATCCT 381282
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| || |||||||| | | || || |||| || | ||| ||||| |||
Sbjct 381283 CGAGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCCT 381342
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | | |||||||| | || || || || | || || ||||
Sbjct 381343 GAATCTTGGTCTTAACATTATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTCT 381402
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||| ||||| ||||||||||||||
Sbjct 381403 TACCAGTGAGAGTCTTGACGAAGATTTGCAT 381433
>seq90
Length=207308
Score = 123 bits (136), Expect = 2e-23
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || ||||||||||||||||||||| | || || |||| ||
Sbjct 159081 ACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCCTCA 159140
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||||||||| || ||||||| || | || ||||| ||
Sbjct 159141 AGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCTTGG 159200
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||||| || || ||||| | || || ||||
Sbjct 159201 ATCTTGGTCTTGACATTGT--CGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCT 159258
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || |||||||| ||||| ||||||||
Sbjct 159259 TACCGGTAAGGGTCTTGACGAAAATTTGCAT 159289
>seq111
Length=751517
Score = 102 bits (112), Expect = 6e-17
Identities = 160/225 (71%), Gaps = 8/225 (4%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| | | || |||||||| || |||||||||||||||||| ||
Sbjct 299259 ATACCACCTCTCAAACGGAGGACAAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCA 299200
Query 44168 GCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| || || || | || || || ||||| || || ||||| | ||| || |||||||
Sbjct 299199 GAAAG--GGTTCTGCCATCTTCGAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTG 299142
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | |||||||| ||| ||||| ||| || ||| | |||||||||| ||
Sbjct 299141 GGGGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACATTGT--CAATGGTGTCGGAAGA 299084
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
|| ||||| | || || ||||| || || |||||||| |||||
Sbjct 299083 CTCGACCTCGAGGGTGATGGTCTTACCAGTAAGGGTCTTGACGAA 299039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989671694422
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