Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq32 116 3e-21
>seq32
Length=396137
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || | || || ||| |||||| || ||||| ||||||||
Sbjct 380751 CCACCACGCAGACGAAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 380810
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| | | || || || ||||| || ||||| |||| ||||||||||| | ||||
Sbjct 380811 AGGGTTCTTCCATCCTCAAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 380870
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || ||| |||| | | | |||||| ||||| ||
Sbjct 380871 ATGCCCTCCTTGTCTTGGATCTTGGTCTT-AACGTTGTCGATGGTGTCGGAAGACTCGAC 380929
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || ||||| || || ||||| ||||| || |||||
Sbjct 380930 CTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 380977
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || ||| || || || ||||| || || ||
Sbjct 381663 CCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAA 381722
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || || ||||| || ||||| |||| ||||||||||| | |||
Sbjct 381723 AGAGTACGACCGTCTTCCAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGA 381782
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||| | ||| | || | | ||| | | | ||||| ||||| ||
Sbjct 381783 ATACCTTCCTTGT-CTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGAC 381841
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || ||||| || || ||||||||||| || |||||
Sbjct 381842 CTCAAGAGTGATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCAT 381889
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || ||| || || || ||||| || || ||
Sbjct 380979 CCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAA 381038
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || ||||| ||||| || ||||| |||| ||||||||||| | ||||
Sbjct 381039 AGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 381098
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || ||| ||| | | |||||| || || ||
Sbjct 381099 ATACCCTCCTTGTCTTGGATCTTGGTCTT-AACATTATCGATGGTGTCGGAAGATTCAAC 381157
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || ||||| |||| ||||| ||||| || |||||
Sbjct 381158 TTCGAGAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 381205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303040719200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |