Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 102 2e-16 seq3 96.9 7e-15 >seq2 Length=1354397 Score = 102 bits (112), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 319810 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 319869 || |||| |||||| || ||||| ||||| | | |||| || ||||| || || Sbjct 1084736 CCATCGATATCGTGCTCGACGTAGACAGTTCTACATTCATCTTGAGTTGGGAAACCATCG 1084795 Query 319870 AGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACAC 319929 | || ||||| | | ||| | ||||| || |||||||| || |||||||| ||||| Sbjct 1084796 ACTTGACCGTTAGCGACAGCTCTCATCAAAGTAGATTTACCAGCACCGTTTGGACCACAT 1084855 Query 319930 AGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCA 319989 |||||||| | | || | |||| | || | || ||||||| | || || || Sbjct 1084856 AGACCGTATCTTCTACCTCTCTTCAATCTCAATTGAGTCTTGTTCAACAAGATCTTAGCA 1084915 Query 319990 CCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || |||| || |||||||| | ||| ||||||||||| Sbjct 1084916 CCGTAAGCCAAGGAGAATTCACAGTTACATAGATCCTCACC 1084956 >seq3 Length=1292049 Score = 96.9 bits (106), Expect = 7e-15 Identities = 243/367 (66%), Gaps = 2/367 (1%) Strand=Plus/Minus Query 282392 CACGATAGGTGTGATGAACTTCTTCAAGAAA-CCTGGAATTTCTAGGAGACTGGGAAAAC 282450 |||||| || || ||||| ||| ||||| || ||||| || | | || ||||| Sbjct 742068 CACGATGGGCGTAATGAA-TTCGAGCAGAAATCCCGGAATATCCAACAAACCAGGAAAGG 742010 Query 282451 AGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 282510 |||||| |||||||| || | | || ||||||| || ||| ||| || | Sbjct 742009 AGCTATCCAAAAAGTTGATAATCAACCCTTTGATGTGAGAGCCATCATGATCTTGATCTG 741950 Query 282511 TCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTT 282570 |||||||||||| ||| ||||| |||||||| || | || || ||||| || Sbjct 741949 TCATGATCATCAAATGGCCGTACCTCAGAGAGCTGGTATTTTCATATCGTTTACGATGTT 741890 Query 282571 GAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCCACAG 282630 |||| |||| ||| | ||| | || || ||| | |||||| || | | ||| Sbjct 741889 GAAGACCCATAATCTTTTTAATGGCCTGAATCTCTGCATTCTTTAGTATTTGTTCAGCAG 741830 Query 282631 ATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGAC 282690 || || | ||||||||| | |||||| || || || || |||||| || | || Sbjct 741829 TGGCCTCCCTAACGTTCAGTATCTTACCACGAAGTGGGTAACAACCATAGTAATCTCTAC 741770 Query 282691 CGACCACGGACAGTCCTGCAATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGATGA 282750 | || || || | |||||| | || || | || ||||| || || |||| | || Sbjct 741769 CAACAACTGATAATCCTGCTACAGCTAGCGACAAAGCAGAATCACCTTCGGTCAGCACGA 741710 Query 282751 GAGTACA 282757 ||||||| Sbjct 741709 GAGTACA 741703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823891573040