Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq8 336 3e-87
seq5 246 4e-60
>seq8
Length=833973
Score = 336 bits (372), Expect = 3e-87
Identities = 1433/2258 (63%), Gaps = 37/2258 (2%)
Strand=Plus/Plus
Query 52798 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 52857
|||||| | ||||||||||| | ||| || |||| || || | || |||||||| ||
Sbjct 324581 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 324640
Query 52858 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGG 52917
|| || | ||| |||| ||||| ||||||||||| || | ||| | | ||
Sbjct 324641 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 324700
Query 52918 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 52977
| | || || || |||| ||||| ||||||||| | | | | || || ||
Sbjct 324701 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 324760
Query 52978 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 53036
||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | |
Sbjct 324761 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 324819
Query 53037 CTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
||| |||| || | ||| || || || ||| ||| || || | ||| |
Sbjct 324820 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 324879
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153
| ||||| ||| | | ||| ||| | | || | | || || || | ||
Sbjct 324880 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 324939
Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213
| ||||| || || || || | |||| ||| ||||| || || || || | | |||
Sbjct 324940 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 324999
Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273
| || | || | ||| || | ||| || ||||| ||||| || |||| | ||| |
Sbjct 325000 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 325059
Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333
|||||| ||| ||| |||| | | || | || ||||||| ||| |||||||| |
Sbjct 325060 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATG 325119
Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393
|| || | |||||| | | | || ||| |||| |
Sbjct 325120 GTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAG 325179
Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453
| ||| ||||| ||||||| || | ||||| || || || | | ||| || |
Sbjct 325180 TGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGA 325239
Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513
| ||||||||||| | | |||||||| | ||||| | ||||||||| | |
Sbjct 325240 TAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCA 325299
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| | |||||| |||| || || || | ||||| | | | |||||||| | |||| |||
Sbjct 325300 ACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATAT 325359
Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633
||||| || |||||| |||| || || || || ||| || | || || | ||| |
Sbjct 325360 TAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTAC 325419
Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATT-----GTC----CAT 53684
|| || ||| | | | | || ||| ||||||| | ||| |||
Sbjct 325420 GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCAT 325479
Query 53685 CTATTACAAACATG--TTCA--------ATGCAATAGATGCCAGATTACAAACGGCTACC 53734
| || | ||| || | || | || || || |||| ||||||||||| |
Sbjct 325480 C-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTC 325538
Query 53735 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 53794
|||| || | | || | | || ||| || | ||| | || ||||| ||
Sbjct 325539 TCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCC 325598
Query 53795 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCA 53854
|| || | ||| || |||||| | ||||| ||||| || ||||| |||||||| ||||||
Sbjct 325599 AAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCA 325658
Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTG 53914
|| || | || ||||| | || || | ||| | |||| || || | |||
Sbjct 325659 GTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC--TTTC 325716
Query 53915 TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACAT 53972
|| | | ||| |||| || |||||| |||||| || || || ||||||
Sbjct 325717 TACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACAT 325776
Query 53973 TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 54032
||| || ||| |||| ||| | | ||| | ||| || || | || | || |
Sbjct 325777 CAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACAC 325836
Query 54033 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 54092
||||||| || | ||| |||||||| || ||| || | |||||| | | | || |
Sbjct 325837 GTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTT 325896
Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152
| || || ||||| | ||| | ||| | | || || | ||||| |||||||
Sbjct 325897 CCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCA 325956
Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212
|||| | | | | | || |||| |||||| || || ||||| | || | ||| ||||
Sbjct 325957 AGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGT 326016
Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272
| || | || | | ||| || || | || || || | ||| || || || | ||||
Sbjct 326017 TGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATAT 326076
Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332
| || | | |||||| || || | ||| || || || || | ||||| |
Sbjct 326077 ATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAA 326136
Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392
| | || ||| || || ||||| || || ||||| || |||||| ||||| |
Sbjct 326137 TCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGA 326196
Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452
||| ||||| |||||| || | || ||| || ||||| || | || |||||||
Sbjct 326197 TTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAG 326256
Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512
| || | || || | || | ||||| || ||||| ||||| || || || ||
Sbjct 326257 CATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGT 326316
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
|||||| || || || || | ||| | ||| || ||||| | |||| ||| |
Sbjct 326317 CACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCAC 326376
Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 54630
||||| |||||| || || |||| |||||| || ||||||||||| | |||
Sbjct 326377 CATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTGA 326436
Query 54631 AAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 54690
|| |||| || |||| |||| | ||||| | | |||||||| |||||| || | ||
Sbjct 326437 AA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATGTC 326494
Query 54691 CATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTA 54748
||| | ||| || || || |||||||| ||| || || || || ||||||||
Sbjct 326495 CAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTG 326552
Query 54749 AATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808
|| || || ||| || | | ||| |||| | || | ||||| | ||| || |
Sbjct 326553 AACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATA 326612
Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 54868
|||||||||||||| | | | |||||||| ||||| || || | || ||
Sbjct 326613 GCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGTT 326672
Query 54869 TCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACC 54928
|| || | || | |||||||||| || || || || || | ||| | || || |
Sbjct 326673 TCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGATA 326732
Query 54929 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTA 54988
| | || |||| || ||| ||||| ||| || || ||||| ||||| |
Sbjct 326733 CGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGAT 326792
Query 54989 ATACGAGATGTGATTTTATCAAACATGACATTTTCCtt 55026
||||| | || || || || ||| | |||| ||||||
Sbjct 326793 ATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326830
>seq5
Length=1086982
Score = 246 bits (272), Expect = 4e-60
Identities = 414/594 (70%), Gaps = 10/594 (2%)
Strand=Plus/Plus
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
|||||| |||||| |||| ||| || ||||| | || |||||||| |||||||| ||
Sbjct 839071 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 839130
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
|| |||||||| || ||| || | ||| || || | ||||| || || ||||||||
Sbjct 839131 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 839190
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATG 24310
| ||||| | || || || |||| | ||| ||| | | | | ||||| ||
Sbjct 839191 ATAACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 839250
Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370
||||| | |||||| |||||||||| ||| | ||| || | || || |||||
Sbjct 839251 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATT 839310
Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430
|| | | | |||| || ||| || | ||| |||||||| || || ||| |
Sbjct 839311 GAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 839370
Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490
|| || ||||||||||| || ||||| || || ||||||||| |||| || | |||
Sbjct 839371 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAAT 839430
Query 24491 CTGTACTTCTATAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 24548
|| |||||| || ||| || || ||||||| ||||| ||||| || ||| |||
Sbjct 839431 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 839488
Query 24549 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 24605
||||| || ||||| ||| | || ||| || ||||| ||| | | | ||||||
Sbjct 839489 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 839548
Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665
||||||| ||||| || |||| ||| | ||||| | ||||| || || ||||||||
Sbjct 839549 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 839608
Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 24719
| |||||| | ||| || ||||| |||| ||||| || | ||||||||||
Sbjct 839609 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 839662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721540627840
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