Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq5 190 2e-43
>seq5
Length=1086982
Score = 190 bits (210), Expect = 2e-43
Identities = 566/858 (66%), Gaps = 35/858 (4%)
Strand=Plus/Plus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
||||||||||| || ||||| || || || | | || || || ||||| ||||||||
Sbjct 838796 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 838855
Query 16019 GGATTTTT-----TGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCG 16073
|| || | |||| ||| | || || || || | | || || |||||| |
Sbjct 838856 GGGTTAGTCACGTTGAAAAATT-TCTTGTTC----CCGAAAGCGACCAGTAGTCTATCAG 838910
Query 16074 CCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGA 16133
| || || || | ||||| ||||| | || |||||| || | ||| ||| || |
Sbjct 838911 CGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTA 838970
Query 16134 TTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTA 16193
|| || | || | | ||||| || | || |||||| | || || | || | |
Sbjct 838971 GAGCATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAATCT---TTTCGA 839027
Query 16194 CACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTATACAAGCAAAATCAC 16247
| || || ||| || ||| | || || ||| | || ||| ||||||||
Sbjct 839028 TA--ATGGAA-GGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGG 839084
Query 16248 AATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTC 16307
||| || ||||| || || | || || ||||| ||||| || |||||||||||||| |
Sbjct 839085 TATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGAC 839144
Query 16308 CTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTG 16367
|| || || | ||| || ||||| ||||| ||||| |||||||| |||||||| |
Sbjct 839145 CTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATAACCTTCAATGG 839204
Query 16368 CGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc---tatccattttt 16424
| || || |||||||||| ||| || | || || ||| || |||||| |
Sbjct 839205 CAGCGAAAGCAACCAATCTCTCTGCGAA---GATAGATTCACTGTCCTGAATCCATCTGA 839261
Query 16425 tagcccaatttgctttttgtttAA-CACAGTTCATGTTCTCTATTGCATTAAATAAATAA 16483
||||||| | || || | ||||| | || ||||| || || ||||| ||||| ||
Sbjct 839262 TAGCCCATTCGGCCTTCTCTTTAATCTGAG-GAATGTTTTCAATCGCATTGAATAAGAAA 839320
Query 16484 tttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGA 16543
| |||| || ||| ||||||||||| |||| | ||| | ||||| |||
Sbjct 839321 TCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGA 839380
Query 16544 ATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCA 16603
|| || ||||| || || |||||||| || ||| ||||||| | ||||| |||||
Sbjct 839381 ATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCT 839440
Query 16604 G-AGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662
| | | ||| | || |||| || || || ||||| ||||| || ||||| || ||
Sbjct 839441 GCACTGAAA-TTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGC 839499
Query 16663 AAGTATGTGTTTAATAAAAtttttttCGTTATC--TGA-AAGTTTTAACCAGTCAGAAAA 16719
| | | || ||| | ||||||| || | | | | || ||| ||| ||
Sbjct 839500 CAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATGAAT 839559
Query 16720 ATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACAT 16779
||| || |||| ||| | |||||| | ||||| || ||||| | || | ||||||
Sbjct 839560 ATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGC 839619
Query 16780 TTTCCATATGTCTTCGTA 16797
|| ||| || || | |||
Sbjct 839620 TTGCCAAATCTCATGGTA 839637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511953748800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |