Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 194 1e-44 seq2 109 5e-19 seq1 100 3e-16 seq6 96.9 3e-15 >seq5 Length=1086982 Score = 194 bits (214), Expect = 1e-44 Identities = 583/886 (66%), Gaps = 37/886 (4%) Strand=Plus/Minus Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593 ||||||||||| | || || || |||| | || |||||| | ||| || | ||| Sbjct 839664 CGTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCA 839605 Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653 || || ||||| ||||| | |||||| | || || || |||||| | |||||| || Sbjct 839604 GAGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAAT 839545 Query 57654 TCCCTCAAAGAATCTGAGAGAAATTTTATTAAACAC----GTGTTGGCGTTTTTCGCCGC 57709 || | |||| || |||| || || | | | || ||||| || || || || Sbjct 839544 AACC-GTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGC 839486 Query 57710 ATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA--CAAGAAGTGCAAGTG 57767 || |||||||| || || |||||||| || | ||| ||||| |||||||||| | Sbjct 839485 CTCTGATGGTATAGTAAATGAGAATTTAGTTG--AGAATTTCAGTGCAGAAGTGCAAATT 839428 Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 | || || | ||| || || || || ||| | || |||||| | || ||||| | Sbjct 839427 CCAGAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACC 839368 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACG-TAGACTGTTC 57884 ||||| || | || ||||| || | ||||| ||| | || || || | | ||| Sbjct 839367 TATTCCCTGTTAATTGATACTTATATCAAGGATCCAA--AGGA-AAGCGATTTCTTATTC 839311 Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA 57944 || ||||| |||| || || ||| ||||||| || ||| | |||| |||||| Sbjct 839310 AATGCGATTGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATT 839251 Query 57945 AAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001 | | || | | | ||||| ||||| | | || ||||| ||| | |||||| Sbjct 839250 CA---GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGT 839194 Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061 |||||||| || |||||| || || || ||| ||||||| || || ||||| Sbjct 839193 TATTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCA 839134 Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121 || || |||||| ||||| ||||| | | || || ||| | ||||| |||||||| Sbjct 839133 GGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCA 839074 Query 58122 TGCCTAATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTGG---ACAT 58177 || ||| | | |||| | ||||| || || | | ||| | | | || Sbjct 839073 TGTCTACTATTTGCTCATTTGAAGAATAAGCCAGATCC----TTCCATTATCGAAAAGAT 839018 Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237 ||| || || || |||| ||||||||| || ||| ||| || ||||| || | | Sbjct 839017 TATTACTGAAGCCGTCGAGATCGAAAAGAGGTACTTCATCGATGCTCTACCCGTTTCTTT 838958 Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297 | ||||||||| || ||||| ||||| ||||||| || || || ||||| | Sbjct 838957 ATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGATAGACTACT 838898 Query 58298 GCTCGAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGA 58353 | ||| || || | || | | || |||| || || || |||||||| ||| Sbjct 838897 GGTCG--CT--TTCGGGAACAAGAAATTTTTCAACGTGACTAACCCATTTGATTTCATGG 838842 Query 58354 ATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399 | |||||||| | || ||||| || ||||||||||| | ||| Sbjct 838841 AGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAAAGAGAGT 838796 >seq2 Length=1354397 Score = 109 bits (120), Expect = 5e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| |||||| |||| || || || ||||| | || |||||| | || |||| | | Sbjct 395598 TTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 395657 Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 || | ||||| || ||| | | |||||||||| | || || ||||| || | Sbjct 395658 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 395716 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || || ||||| || || ||||||||| || ||| || ||| || ||||| |||| Sbjct 395717 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAA 395776 Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| ||||| || |||| || ||| |||| || |||| Sbjct 395777 AGGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGGTA 395818 >seq1 Length=1418021 Score = 100 bits (110), Expect = 3e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || || || ||||| || || || |||||||| || || | ||||| || | ||| | | Sbjct 984118 TCGACCCGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTC 984177 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 | || ||||| ||| ||||||| | | | ||| || | | |||||||||||| Sbjct 984178 ATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCAT 984237 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 |||||||| || | | | | || || || ||||| ||||| |||||||| || || | Sbjct 984238 GGCTCGAGATATATGCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTT 984297 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566 || ||||| ||| | || | ||||| || || | ||| | ||| Sbjct 984298 GCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCTCGAC 984342 >seq6 Length=1070623 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| |||| || || || || ||| | || || ||| | Sbjct 959571 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 959630 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | ||||| | || |||||||| || | || || ||| Sbjct 959631 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 959690 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || || ||||| || || |||||||| || ||| || || || Sbjct 959691 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 959750 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| ||||| ||| | || |||| || ||| |||| || ||| Sbjct 959751 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGT 959801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766355423360