Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12-
08] 8 sequences; 9,220,678 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 194 1e-44
seq2 109 5e-19
seq1 100 3e-16
seq6 96.9 3e-15
>seq5
Length=1086982
Score = 194 bits (214), Expect = 1e-44
Identities = 583/886 (66%), Gaps = 37/886 (4%)
Strand=Plus/Minus
Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593
||||||||||| | || || || |||| | || |||||| | ||| || | |||
Sbjct 839664 CGTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCA 839605
Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653
|| || ||||| ||||| | |||||| | || || || |||||| | |||||| ||
Sbjct 839604 GAGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAAT 839545
Query 57654 TCCCTCAAAGAATCTGAGAGAAATTTTATTAAACAC----GTGTTGGCGTTTTTCGCCGC 57709
|| | |||| || |||| || || | | | || ||||| || || || ||
Sbjct 839544 AACC-GTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGC 839486
Query 57710 ATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA--CAAGAAGTGCAAGTG 57767
|| |||||||| || || |||||||| || | ||| ||||| |||||||||| |
Sbjct 839485 CTCTGATGGTATAGTAAATGAGAATTTAGTTG--AGAATTTCAGTGCAGAAGTGCAAATT 839428
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| || || | ||| || || || || ||| | || |||||| | || ||||| |
Sbjct 839427 CCAGAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACC 839368
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACG-TAGACTGTTC 57884
||||| || | || ||||| || | ||||| ||| | || || || | | |||
Sbjct 839367 TATTCCCTGTTAATTGATACTTATATCAAGGATCCAA--AGGA-AAGCGATTTCTTATTC 839311
Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA 57944
|| ||||| |||| || || ||| ||||||| || ||| | |||| ||||||
Sbjct 839310 AATGCGATTGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATT 839251
Query 57945 AAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001
| | || | | | ||||| ||||| | | || ||||| ||| | ||||||
Sbjct 839250 CA---GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGT 839194
Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061
|||||||| || |||||| || || || ||| ||||||| || || |||||
Sbjct 839193 TATTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCA 839134
Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121
|| || |||||| ||||| ||||| | | || || ||| | ||||| ||||||||
Sbjct 839133 GGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCA 839074
Query 58122 TGCCTAATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTGG---ACAT 58177
|| ||| | | |||| | ||||| || || | | ||| | | | ||
Sbjct 839073 TGTCTACTATTTGCTCATTTGAAGAATAAGCCAGATCC----TTCCATTATCGAAAAGAT 839018
Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237
||| || || || |||| ||||||||| || ||| ||| || ||||| || | |
Sbjct 839017 TATTACTGAAGCCGTCGAGATCGAAAAGAGGTACTTCATCGATGCTCTACCCGTTTCTTT 838958
Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297
| ||||||||| || ||||| ||||| ||||||| || || || ||||| |
Sbjct 838957 ATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGATAGACTACT 838898
Query 58298 GCTCGAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGA 58353
| ||| || || | || | | || |||| || || || |||||||| |||
Sbjct 838897 GGTCG--CT--TTCGGGAACAAGAAATTTTTCAACGTGACTAACCCATTTGATTTCATGG 838842
Query 58354 ATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399
| |||||||| | || ||||| || ||||||||||| | |||
Sbjct 838841 AGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAAAGAGAGT 838796
>seq2
Length=1354397
Score = 109 bits (120), Expect = 5e-19
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| |||||| |||| || || || ||||| | || |||||| | || |||| | |
Sbjct 395598 TTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 395657
Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319
|| | ||||| || ||| | | |||||||||| | || || ||||| || |
Sbjct 395658 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 395716
Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379
| || || ||||| || || ||||||||| || ||| || ||| || ||||| ||||
Sbjct 395717 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAA 395776
Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| ||||| ||||| || |||| || ||| |||| || ||||
Sbjct 395777 AGGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGGTA 395818
>seq1
Length=1418021
Score = 100 bits (110), Expect = 3e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401
|| || || ||||| || || || |||||||| || || | ||||| || | ||| | |
Sbjct 984118 TCGACCCGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTC 984177
Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461
| || ||||| ||| ||||||| | | | ||| || | | ||||||||||||
Sbjct 984178 ATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCAT 984237
Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521
|||||||| || | | | | || || || ||||| ||||| |||||||| || || |
Sbjct 984238 GGCTCGAGATATATGCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTT 984297
Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566
|| ||||| ||| | || | ||||| || || | ||| | |||
Sbjct 984298 GCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCTCGAC 984342
>seq6
Length=1070623
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| |||| || || || || ||| | || || ||| |
Sbjct 959571 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 959630
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || |||||||| || | || || |||
Sbjct 959631 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 959690
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| || ||| || || ||
Sbjct 959691 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 959750
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||| | || |||| || ||| |||| || |||
Sbjct 959751 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGT 959801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766355423360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |