Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 111 3e-19 seq8 96.9 7e-15 seq5 89.7 1e-12 >seq2 Length=1354397 Score = 111 bits (122), Expect = 3e-19 Identities = 238/351 (68%), Gaps = 25/351 (7%) Strand=Plus/Plus Query 35382 ACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTG 35441 |||| ||| |||||||||||||| || || || ||||| |||||| | |||||||||| Sbjct 443588 ACGAGAGACGTGAGGGAGATTTGGGGCCGGTTTATGGATTTCAATGGAGGCATTTTGGTG 443647 Query 35442 CTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAAT- 35500 || |||| | || || | ||| || ||||| | || |||||||||||||| || Sbjct 443648 CTAAATACAAGACATGCGATGACGACTACACTGGCCAAGGATTTGATCAATTGGCCGATT 443707 Query 35501 --ATACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGG 35557 || |||| || | |||| |||||| | || ||||| || || |||| |||||| Sbjct 443708 TGATCTCAAAG---CT-AAAGAACAATCCATACGACAGAAGAATCATCATGAGTGCATGG 443763 Query 35558 AATCCTATGGATCTTCACCT-TATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTA 35616 ||||| ||| ||| | | |||||| | || ||||| || | | |||| || || Sbjct 443764 AATCCACCAGAT-TTCCCATCGATGGCTTTGCCGCCATGTCATGTCTTTTCTCAGTTCTA 443822 Query 35617 TGT---------GGCTAATGGAGA------ATTGTCGTGCCAGTTGTATCAGCGAAGCGG 35661 ||| | |||||| | | | || || | ||||||| || | | Sbjct 443823 TGTCAGTTTTCCTGAGAATGGAAAGCCAAGACTTTCTTGTCTACTGTATCAAAGATCCTG 443882 Query 35662 AGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGAC 35712 ||| | || | || ||||||||||| |||||||| || | |||||||| Sbjct 443883 TGATATGGGACTAGGAGTGCCCTTCAACATTGCATCGTATGCGCTTCTGAC 443933 >seq8 Length=833973 Score = 96.9 bits (106), Expect = 7e-15 Identities = 173/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||| || || || || ||||| | |||||| ||||||||||| ||| Sbjct 326118 CCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATG 326177 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGTTCCACA 94910 ||||| | | | | | ||||| || || || | || ||| ||| || ||| Sbjct 326178 GAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTG-GAGTACCAGC 326236 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || || || |||||||| | || || | ||||| |||| ||| || || Sbjct 326237 ATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTC 326296 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 ||| |||| | |||||| || ||||| || ||||| || | ||||||||| | || Sbjct 326297 AATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTG 326356 Query 95031 AGGGCGCTCA 95040 ||| || ||| Sbjct 326357 AGGACGTTCA 326366 >seq5 Length=1086982 Score = 89.7 bits (98), Expect = 1e-12 Identities = 292/445 (66%), Gaps = 19/445 (4%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| ||||||| |||||| ||| | || || | || |||||| Sbjct 839217 GTTGCTTTCGCTGCCATTGAAGGTTATTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGG 839158 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | ||| | |||| ||||| || | || || || || || | || || Sbjct 839157 TTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGAT 839098 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA-TACCCC 102096 |||||| | ||| ||| |||||||| | || || | |||| || || || Sbjct 839097 GAAGGTTTACATACCGATTTTGCATGTCTACTATTTGCTCA----TTTGAAGAATAAGCC 839042 Query 102097 ATCAAGAGAAAGG-ATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAAT 102152 | || ||| | |||| || | |||||||||||| || ||| |||| Sbjct 839041 A----GATCCTTCCATTATCGAAAAGATTATTACTGAAGCCGTCGAGATCGAA-AAGAGG 838987 Query 102153 TTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211 | || || | | | || || ||| ||| |||| |||||| | | |||||| |||| Sbjct 838986 TACTTCATCGATGCTCTACCCGTTTCTTTATTGGGTATGAACGCCGACCTGATGAACCAG 838927 Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATA 102269 ||| |||| || || || |||| |||| |||| | | || || ||||| | | Sbjct 838926 TACGTTGAGTTCGTCGCTGATAGACTACTGGTCGCTTTCGGGAACAAGAAATTT--TTCA 838869 Query 102270 ATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTT 102329 | || || ||||| || |||||||| || || || || | ||||||||| |||| Sbjct 838868 ACGTGACTAACCCATTTGATTTCATGGAGAACATCTCGCTGGCTGGTAAGACCAATTTTT 838809 Query 102330 TTGAAAAGAGAGTCGCCGAGTATCA 102354 | |||||||||||| | || || || Sbjct 838808 TCGAAAAGAGAGTCTCTGACTACCA 838784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583898567640