Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq8 354 1e-92 seq5 273 3e-68 >seq8 Length=833973 Score = 354 bits (392), Expect = 1e-92 Identities = 1439/2259 (64%), Gaps = 39/2259 (2%) Strand=Plus/Plus Query 62036 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62095 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 324581 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 324640 Query 62096 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62155 || || | ||| |||| ||||| ||||||||||| || | ||| | | || Sbjct 324641 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 324700 Query 62156 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62215 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 324701 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 324760 Query 62216 CATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62274 ||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 324761 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 324819 Query 62275 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331 ||| |||| || | ||| || ||||| ||| ||| || || | ||| | Sbjct 324820 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 324879 Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391 | ||||| ||| | | ||| ||| | | || | | ||||| || | || Sbjct 324880 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 324939 Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451 ||||||| || || || || | |||| ||| ||||| || || || || | ||| Sbjct 324940 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 324999 Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511 | || | || | ||| || | ||| || ||||| ||||| || |||| | ||| | Sbjct 325000 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 325059 Query 62512 TTCTAAGACCGTATGTTCTGATT-TTATCTTTTAGATGTTCCCAATTCCAAAGATCCGAC 62570 |||||| ||| ||| |||| || |||| | ||| |||||| ||| |||||||| Sbjct 325060 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGT-CCCAATCCCATAGATCCGAT 325118 Query 62571 GGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62630 ||| || || | |||||| | | | || ||| |||| Sbjct 325119 GGTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAA 325178 Query 62631 GTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAA 62690 || || ||||| ||||||| || | | ||| || || || | | ||| || Sbjct 325179 GTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAG 325238 Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT 62750 || ||||| ||||| | | |||||||| | ||||| | ||||||||| | Sbjct 325239 ATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGC 325298 Query 62751 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62810 || | |||||| |||| || || || | ||||| | | | |||||||| | |||| || Sbjct 325299 AACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATA 325358 Query 62811 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62870 |||||| || |||||| |||| || || || || ||| || | || || | || Sbjct 325359 TTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTA 325418 Query 62871 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC---------CCA 62921 | || || ||| | | | | || ||| ||||||| | | | ||| Sbjct 325419 CGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCA 325478 Query 62922 TCTATTACAAACATG--TTCA--------ATGCAACAGATGCCAGATTACACACGGCTAC 62971 || || | ||| || | || | || | || |||| ||||| ||||| Sbjct 325479 TC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGT 325537 Query 62972 CTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCC 63031 ||||| || | | || | | || ||| || | ||| | || || || || Sbjct 325538 CTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACC 325597 Query 63032 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 63091 || || | ||| || |||||| | ||||| ||||| || ||||| |||||||||||||| Sbjct 325598 CAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACC 325657 Query 63092 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 63151 ||| || | |||||||| | || || | ||| | | |||| || || | ||| Sbjct 325658 AGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC--TTT 325715 Query 63152 GTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63209 || | | | ||| |||| | |||||| ||| || || || || ||||| Sbjct 325716 CTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACA 325775 Query 63210 TTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63269 | ||| | ||| |||| ||| | | ||| | ||| || || | || | || Sbjct 325776 TCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACA 325835 Query 63270 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCC 63329 |||||||| || | ||| |||||||| || ||| || | |||||||| | | || Sbjct 325836 CGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCT 325895 Query 63330 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63389 || || || ||||| | ||| | ||| | | || || | ||||| |||||| Sbjct 325896 TCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCC 325955 Query 63390 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63449 ||||| | || | | | || |||| |||||| || || ||||| | || | ||| ||| Sbjct 325956 AAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTG 326015 Query 63450 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63509 || || | || | | ||| || || | ||||| || |||| || ||||| | ||| Sbjct 326016 TTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATA 326075 Query 63510 TAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63569 || || | | |||||| || || | ||| || || || || | ||||| Sbjct 326076 TATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAA 326135 Query 63570 ATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTA 63629 || | || ||| || || || || || || || || ||| ||||| ||||| Sbjct 326136 ATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCG 326195 Query 63630 AGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAA 63689 | ||| ||||| |||||| || | || | ||| || ||||| || | || |||||| Sbjct 326196 ATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAA 326255 Query 63690 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC 63749 || || | || || | || | ||||| || ||||||||||| || || || || Sbjct 326256 GCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCG 326315 Query 63750 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTG 63809 |||||| || || || || | ||| | ||| || ||||| | |||| | | || Sbjct 326316 TCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCA 326375 Query 63810 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 63867 ||||| ||| || || || |||| |||||| || ||||||||||| | || Sbjct 326376 CCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTG 326435 Query 63868 AAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATAT 63927 ||| |||| || |||| |||| | || || | || |||||||| |||||| || || | Sbjct 326436 AAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATGT 326493 Query 63928 CCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 63985 |||| | ||| || || || |||||||| ||| || || || || |||||||| Sbjct 326494 CCAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTT 326551 Query 63986 GAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATAT 64045 ||| || || || || | | ||| |||| | || | |||||| | ||| || || Sbjct 326552 GAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGAT 326611 Query 64046 GGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTAT 64105 |||||||| ||||| | | | |||||||| ||||| || || | || | Sbjct 326612 AGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGT 326671 Query 64106 TTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAAC 64165 ||| || |||| | |||||||||| || || || || || | ||| | || ||| | Sbjct 326672 TTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGAT 326731 Query 64166 CTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCT 64225 | | || |||| || ||| ||||| | | || || |||||||| || | Sbjct 326732 ACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGA 326791 Query 64226 AATACGAGACGTGATTTTATCAAACATGACATTTTCCTT 64264 ||||| | || || || || ||| | |||| |||||| Sbjct 326792 TATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326830 >seq5 Length=1086982 Score = 273 bits (302), Expect = 3e-68 Identities = 420/594 (71%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 |||||| |||||| || | ||| || ||||| | || ||||||||||||||||| || Sbjct 839071 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 839130 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || |||||||| || ||| || | ||| || || | ||| || || || |||||||| Sbjct 839131 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 839190 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATG 33757 ||||| | ||||| || |||| | ||||||| | | | | ||||| || Sbjct 839191 ATAACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 839250 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | |||||| |||||||||| ||| | ||| || |||| || ||||| Sbjct 839251 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATT 839310 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 || | | | |||| || ||| || | ||||||||| || || || ||| | Sbjct 839311 GAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 839370 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 || || ||||||||||| || || || || || ||||||||| |||| || | ||| Sbjct 839371 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAAT 839430 Query 33938 CTGCACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCT 33995 |||||||||| || ||| || || ||||||| ||||| ||||| |||||| ||| Sbjct 839431 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 839488 Query 33996 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 34052 ||||| || ||||| ||| | || ||| || ||||| ||| | | | |||||| Sbjct 839489 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 839548 Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112 ||||||| ||||| || |||| ||| | ||||| | ||||| || || |||||||| Sbjct 839549 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 839608 Query 34113 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 34166 | |||||| | ||| || ||||| |||| ||||||||| | |||||||||| Sbjct 839609 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 839662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817537018240