Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 161 9e-35 seq8 150 2e-31 >seq5 Length=1086982 Score = 161 bits (178), Expect = 9e-35 Identities = 411/614 (67%), Gaps = 16/614 (3%) Strand=Plus/Plus Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 ||||| ||| | || ||| |||||||| |||||||||||| ||||| | || | | Sbjct 839054 AAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAAT 839113 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 || |||||||| |||| || ||||| | ||| || || | ||| || ||||||||| Sbjct 839114 TCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCA 839173 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--AT 11789 || ||||| |||||||| || || | || || || || || | ||| ||| | | Sbjct 839174 AAGGAACCTGAAAAGAAATAACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAG 839233 Query 11790 ATACCTTGT-TG-CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTC 11847 ||| || || | || |||||| | | ||||| || || |||| ||| | Sbjct 839234 ATAGATTCACTGTCCTGA-ATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGG 839292 Query 11848 CATTGTTTCTATAGCGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTA 11905 || |||| || || || ||||| | | | |||| | ||| | | ||| ||| Sbjct 839293 AATGTTTTCAATCGCATTGAATAA--GAAATCGCTTTCCTTTGGATCCTTGATATAAGTA 839350 Query 11906 TCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAG 11965 || ||||| | ||| | ||||| ||||| |||||||| ||||| || |||||| Sbjct 839351 TCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAG 839410 Query 11966 AAACATCGTGCCTCTGAACACTGTACATCCACA-TAAAATCTTTCCGCTAAATTCTCATT 12024 |||||| || |||| | || || || || | |||| | || ||||||||||||| Sbjct 839411 AAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATT 839469 Query 12025 TACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC 12084 ||| ||||||||| | ||||| || || | | | | || || || |||||| Sbjct 839470 TACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGT- 839528 Query 12085 TTTAGTTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGG 12140 | | || || |||| |||||||| | ||| || |||| ||| | ||||| | | Sbjct 839529 TCTCATTCATACGGTTATTCCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCG 839588 Query 12141 TCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGA 12200 |||| || ||| ||| | |||||| || ||| || ||||| || || || |||| Sbjct 839589 TCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGA 839648 Query 12201 AAATAACGAACCTA 12214 | | ||| || ||| Sbjct 839649 ATAGAACAAATCTA 839662 >seq8 Length=833973 Score = 150 bits (166), Expect = 2e-31 Identities = 401/611 (66%), Gaps = 4/611 (1%) Strand=Plus/Plus Query 37941 AAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCA 38000 ||| |||| || | ||||| | || |||||| ||| | |||| | | | || ||| Sbjct 325757 AAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCA 325816 Query 38001 TTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAA 38060 ||| ||| | || || |||| ||| || ||||| || | ||| | || | || || Sbjct 325817 TTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAA 325876 Query 38061 ATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATAT 38120 |||| | | | | ||||| || || ||||| | | || ||||| || || Sbjct 325877 ATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGAT 325936 Query 38121 ATCAGCGTGCCATGGTTCTA--TATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCC 38178 || |||||||||||||| | || ||| ||| | || ||||| ||||| | ||| || Sbjct 325937 GTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAA--GCACCTGGCCTTTTGTTACCACCT 325994 Query 38179 TGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGAT 38238 |||| | ||| | | | ||||| || | | | || ||| || | | || || || Sbjct 325995 TGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAA 326054 Query 38239 TTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCT 38298 | ||||| |||| | ||||| | |||| ||| || || || ||| ||| || Sbjct 326055 GTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCA 326114 Query 38299 ATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCT 38358 || ||||| || || || || | ||| |||| || || ||||| | ||||| || Sbjct 326115 ATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCG 326174 Query 38359 ATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCG 38418 || ||||||||| || | | || ||||| |||||| ||||| |||||| || Sbjct 326175 ATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCA 326234 Query 38419 GCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTT 38478 || || || | || ||||| ||||| ||||| || | |||| |||||| || Sbjct 326235 GCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTC 326294 Query 38479 TCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGT 38538 || || || || || || | || |||||||| | || || ||||| | ||||||| Sbjct 326295 TCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGT 326354 Query 38539 TGTGGTCTTTC 38549 || || | ||| Sbjct 326355 TGAGGACGTTC 326365 Score = 120 bits (132), Expect = 3e-22 Identities = 499/782 (64%), Gaps = 9/782 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||| ||||||| |||| | || || | || ||| |||| || ||||| ||||| Sbjct 324585 TCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACCAGTC 324644 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | ||| |||| ||||| ||||||||||| |||| ||| | || ||| | Sbjct 324645 TTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGGAGCA 324704 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 || | || ||| |||||| ||||| || | || | | || |||||||| Sbjct 324705 CGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGCCATC 324764 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 || | ||| ||||||||| || |||||||| || || || | | |||| | | Sbjct 324765 TCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTTCTTGA 324824 Query 37030 GGTAAATC---TAAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATGTC 37085 || | || || || ||| || || ||||||| | || || || ||| || Sbjct 324825 GGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGAT-GTGTTGCTTCATACT 324883 Query 37086 ATTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 || || ||| ||| ||| | | | || | | | || || || |||| || Sbjct 324884 ATCATCCCAGATAC--CTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTTGG 324941 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 || || || ||||| || | | | || |||||| ||| ||||| || | |||| Sbjct 324942 AATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACTCG 325001 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263 || | || || || || || || || ||||| |||||||| || | ||| | ||| Sbjct 325002 TTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGTTT 325061 Query 37264 CTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGG 37323 || | |||| | || || || || || | | ||||||||||| ||| | ||| Sbjct 325062 CTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATGGT 325121 Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 || | ||||| ||| || || | |||||||| | ||||||| | | ||| || Sbjct 325122 TTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAGTG 325181 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 |||||||| | | || || | || || | ||| | | || | || || Sbjct 325182 GAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATA 325241 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503 |||||||| ||||| || |||| || ||||||| || |||| | | ||| Sbjct 325242 GTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAAC 325301 Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTA 37563 | |||||||| ||||||||||| | ||||| | | | || ||||| | | || ||||| Sbjct 325302 ATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTA 325361 Query 37564 GA 37565 || Sbjct 325362 GA 325363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524753147520