Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 392 5e-104 seq5 264 2e-65 >seq8 Length=833973 Score = 392 bits (434), Expect = 5e-104 Identities = 1454/2261 (64%), Gaps = 43/2261 (2%) Strand=Plus/Plus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 324581 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 324640 Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827 || || | ||| |||| ||||||||||||||||| || | ||| | | || Sbjct 324641 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 324700 Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 324701 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 324760 Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 78946 ||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 324761 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 324819 Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 ||| |||| || | ||| || ||||| ||| ||| | || || | ||| | Sbjct 324820 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 324879 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | |||| ||| | | ||| ||| | | || | | || || || | || Sbjct 324880 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 324939 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | ||||| || || || || | |||| ||| ||||| || ||||| || | | | Sbjct 324940 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 324999 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || | || | ||| || | ||| || || |||||||| || |||| | ||| | Sbjct 325000 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 325059 Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243 |||||| ||| ||| |||| | | || | || ||||||||||| ||||| || | Sbjct 325060 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATG 325119 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT-AGCGTATGATCCTGTGTAT 79302 | ||||| ||||| || || | |||||| | | | | | || ||| || Sbjct 325120 GTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA-GAACCTTCATAA 325178 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 || |||||||| ||||| | || || ||||| || || || | ||| || Sbjct 325179 GTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAG 325238 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || |||||||| || | | || ||||| | |||||| | ||||||||| | Sbjct 325239 ATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGC 325298 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 || | |||||| |||| || || || | ||||| | | | |||||||| | |||| || Sbjct 325299 AACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATA 325358 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 ||||| || |||||| |||| || || || || ||| || | || || | || Sbjct 325359 TTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTA 325418 Query 79543 CTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC-----GTC----C 79592 | || | || || ||| | | | | | ||| ||||||| | | ||| | Sbjct 325419 C-GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACC 325477 Query 79593 ATCTATTACAAACATG--TTCA--------ACGCGACAGATGCCAGATTACAAACGGCTA 79642 ||| || | ||| || | || | |||| || |||| ||||||||||| Sbjct 325478 ATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAG 325536 Query 79643 CCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTC 79702 ||||| || | | || | | |||||| || | |||| | |||||||| | Sbjct 325537 TCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTAC 325596 Query 79703 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTAC 79762 | || || | ||| || |||||| | ||||| ||||| || ||||| ||||| ||||||| Sbjct 325597 CCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTAC 325656 Query 79763 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACT 79822 |||| || | |||||||| | || || | ||| | | |||| || || || || Sbjct 325657 CAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGAT---AGTCT 325713 Query 79823 TG-TATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAA 79879 | || | | ||| |||| || ||| || ||| || || || || ||| Sbjct 325714 TTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAA 325773 Query 79880 CATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTA 79939 |||| || || ||| ||| ||| | | ||| | ||| || |||| || | | Sbjct 325774 CATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAA 325833 Query 79940 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 79999 | |||||||| || | ||| |||||||| || ||| || | |||||| | | | || Sbjct 325834 CACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCT 325893 Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059 | || || || ||||| | ||| | ||| | | || || | ||||| |||| Sbjct 325894 CTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTT 325953 Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119 ||||||| | || | | | || || | |||||| || || ||||| | || | ||| | Sbjct 325954 CCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAG 326013 Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 |||| || | || | | ||| || || | || || || ||||| || || || | | Sbjct 326014 TGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAA 326073 Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239 |||| || | | |||||| || || | ||| || || || || | |||| Sbjct 326074 TATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAG 326133 Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299 | || | || ||| || || ||||| || || ||||| ||| ||||| ||||| Sbjct 326134 AAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGG 326193 Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359 | ||| ||||| |||||| || | || ||| || ||||| || | || |||| Sbjct 326194 CGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAG 326253 Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 80419 |||| || | || || | |||| ||||| || ||||||||||| || || || | Sbjct 326254 AAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGT 326313 Query 80420 CCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 80479 | |||||| || || || || | ||| | ||| || ||||| | |||| ||| | Sbjct 326314 CGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTT 326373 Query 80480 TGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 80537 |||||| ||| || ||||| |||| |||||| || ||||||||||| | Sbjct 326374 CACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGT 326433 Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 80597 ||||| |||| || |||| |||| | ||||| | | |||||||| |||||| || | Sbjct 326434 TGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGAT 326491 Query 80598 ATCCAT--GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655 ||||| | | | || || || |||||||| ||| || || || || |||||| Sbjct 326492 GTCCATAACCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAG 326549 Query 80656 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715 ||||| || || || || | | ||| |||| | || | |||||| | ||| || Sbjct 326550 TTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAG 326609 Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCT 80775 | |||||||| ||||| ||| | |||||||| ||||| || || | || Sbjct 326610 ATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAA 326669 Query 80776 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 80835 |||| || |||| | |||||||||| || || || || || | ||| | || || Sbjct 326670 GTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATG 326729 Query 80836 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 80895 | | | || |||| || ||| ||||| ||| || || ||||| ||||| | Sbjct 326730 ATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGT 326789 Query 80896 CTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTT 80936 ||||| | || || || || ||| | |||| |||||| Sbjct 326790 GATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326830 >seq5 Length=1086982 Score = 264 bits (292), Expect = 2e-65 Identities = 417/594 (70%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 |||||| |||||| || | ||| || ||||| | || | |||||| |||||||| || Sbjct 839071 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 839130 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || |||||||| || ||| || | ||| || || | ||||| || || |||||||| Sbjct 839131 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 839190 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATG 50135 ||||| | || || || ||||| | ||||||| | | | | | ||||| || Sbjct 839191 ATAACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 839250 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | |||||| |||||||||| ||| | ||| || |||| || ||||| Sbjct 839251 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATT 839310 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 || | | | |||| || ||| || | ||||||||| || || || ||| | Sbjct 839311 GAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 839370 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || ||||||||||| || || || || || ||||||||| |||| || | ||| Sbjct 839371 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAAT 839430 Query 50316 CTGCACTTCTGTAC--AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 |||||||||| || ||| || ||| ||||||| ||||| ||||| || ||| ||| Sbjct 839431 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 839488 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTC 50430 ||||| || ||||| ||| | || ||| | ||||||| | | | |||||| Sbjct 839489 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 839548 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 ||||||| ||||| || |||| ||| | ||||| | ||||| || || |||||||| Sbjct 839549 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 839608 Query 50491 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 50544 | |||||| | ||| || ||||| |||| ||||||||| | |||||||||| Sbjct 839609 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 839662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268728173120