Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8 309 4e-79 seq5 259 6e-64 >seq8 Length=833973 Score = 309 bits (342), Expect = 4e-79 Identities = 1431/2259 (63%), Gaps = 43/2259 (2%) Strand=Plus/Plus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCC 70850 |||||| | || || ||||| | || || ||||||| || | || |||||||| || Sbjct 324581 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 324640 Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAG 70909 || || | ||| |||| ||||| ||||||||||| || | ||| |||| | | Sbjct 324641 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTT-G 324699 Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969 || | |||||||| |||| || || ||||||||| | | | | || || | Sbjct 324700 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 324759 Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATA 71028 |||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | Sbjct 324760 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT- 324818 Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 |||| |||| || | ||| || ||||| ||| ||| | || || | || Sbjct 324819 TCTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTC 324878 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || |||| ||| | | ||| ||| | | || | | ||| || || | | Sbjct 324879 ATACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATT 324938 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || ||||| || || || || | ||||| ||| ||||| || || || || | || Sbjct 324939 TGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACAC 324998 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || | || | ||| || | ||| || ||||| ||||| || |||| | | | Sbjct 324999 TCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAG 325058 Query 71266 TTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGAT 71325 ||||||| ||||| | ||| | | || | || ||||||| ||| ||||||||| Sbjct 325059 TTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGAT 325118 Query 71326 GGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT-AGCGTATGATCCTGCATA 71384 ||| || || | | | | | || ||| |||| Sbjct 325119 GGTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA-GAACCTTCATA 325177 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 || ||| ||||| || || | || | ||||| || || || | | | || Sbjct 325178 AGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTA 325237 Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504 || |||||||| || | | || ||||| | ||||| | ||||||||| | Sbjct 325238 GATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACG 325297 Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564 || | |||||| |||| || || || | || || | | | |||||||||| |||| | Sbjct 325298 CAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCAT 325357 Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624 |||||| || |||||| |||| || || || || ||| || | || || | || Sbjct 325358 ATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTT 325417 Query 71625 TCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTC---------C 71674 | || | || || ||| | | | | | ||| ||||||| | | | | Sbjct 325418 AC-GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTAC 325476 Query 71675 CATCTATTA-CAA-------ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCT 71724 |||| || | ||| ||||| | || || | || |||| ||||||||||| Sbjct 325477 CATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCA 325535 Query 71725 ACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTT 71784 ||||| || | | || | | |||||| || | ||| | || ||||| Sbjct 325536 GTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTA 325595 Query 71785 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTA 71844 || || || | ||| || |||||| | ||||| ||||| || ||||| || || |||||| Sbjct 325596 CCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTA 325655 Query 71845 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTC 71904 ||||| || | |||||||| | || || | ||| | | |||| || || | || Sbjct 325656 CCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTT- 325714 Query 71905 TTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAG 71962 | || | | ||| |||| || ||| || ||| || || || || || Sbjct 325715 -TCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAA 325773 Query 71963 CATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTA 72022 ||| || || ||| |||| | ||| | | ||| | ||| || |||| || | | Sbjct 325774 CATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAA 325833 Query 72023 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 72082 | |||||||| || | ||| |||||||| || ||| || | |||||| | | | || Sbjct 325834 CACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCT 325893 Query 72083 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 72142 | || || || ||||| | ||| | ||| | | || || | ||||| |||| Sbjct 325894 CTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTT 325953 Query 72143 CCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 72202 ||||||| | || | | | || |||| |||||| || || ||||| | || | ||| | Sbjct 325954 CCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAG 326013 Query 72203 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA 72262 |||| || | || | | ||| || || | || || || | ||| || || || | | Sbjct 326014 TGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAA 326073 Query 72263 TATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAG 72322 |||| || | | |||||| ||| || | ||| || || || || | |||| Sbjct 326074 TATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAG 326133 Query 72323 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 72382 | || | || ||| || || ||||| || || ||||| || |||||| ||||| Sbjct 326134 AAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGG 326193 Query 72383 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 72442 | ||| ||||| |||||| || | || ||| || ||||| || | || |||| Sbjct 326194 CGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAG 326253 Query 72443 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 72502 |||| || | || || | |||| ||||| || ||||||||||| || || || | Sbjct 326254 AAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGT 326313 Query 72503 CCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCT 72562 | ||| || || || || || | ||| | |||||| ||||| | |||| ||| | Sbjct 326314 CGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTT 326373 Query 72563 TGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 72620 |||||| ||| || || || |||| |||||| || ||||||||||| | Sbjct 326374 CACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGT 326433 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680 ||||| |||| || |||| |||| | || || | | |||||||| |||||| || || Sbjct 326434 TGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGAT 326491 Query 72681 ATCCAT--GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 72738 ||||| | | | || || || |||||||| ||| || || || || |||||| Sbjct 326492 GTCCATAACCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAG 326549 Query 72739 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 72798 ||||| || || || || | | ||| |||| | || | |||||| | ||| || Sbjct 326550 TTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAG 326609 Query 72799 ACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCT 72858 | |||||||| ||||| | | | |||||||| ||||| || || | || Sbjct 326610 ATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAA 326669 Query 72859 ATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 72918 |||| || |||| | |||||||||| || || || || || | ||| | || || Sbjct 326670 GTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATG 326729 Query 72919 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 72978 | | | || |||| || ||| ||||| ||| || || ||||| ||||| | Sbjct 326730 ATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGT 326789 Query 72979 CTAATACGAGACGTGATTTTATCAAACATAACATTTTCC 73017 ||||| | || || || || ||| |||||| |||| Sbjct 326790 GATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCC 326828 >seq5 Length=1086982 Score = 259 bits (286), Expect = 6e-64 Identities = 597/890 (67%), Gaps = 22/890 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 || ||||| ||| || | |||||||||||||| ||||| || ||| || || || Sbjct 838781 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 838840 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||||||||| || || || || || ||| ||| || || || | | Sbjct 838841 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGT 838900 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | |||||| |||| ||| || | || ||||||| || ||||| || | | Sbjct 838901 AGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAA 838960 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 ||| || ||||| | | ||| | |||| ||| || ||| || || || ||||| Sbjct 838961 GAAACGGGTAGAGCATCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAAT 839019 Query 42013 AGATCTTACTGTTTCTTCAC---TC-GGTGGATACAATAAATGTTTAAACATCAAACATG 42068 ||| | | | | || || || | ||||| ||| | | ||||| Sbjct 839020 ----CTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATG 839075 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 | |||||| || | ||| |||||||| | || |||||||| |||||||| || || | Sbjct 839076 CAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTG 839135 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188 ||||||| || ||| || | ||| || |||| ||||| || || |||||||| | Sbjct 839136 GCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAATAAC 839195 Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCC 42245 |||| | || || || |||| | ||||||| | | | ||||||| || |||| Sbjct 839196 CTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCC 839255 Query 42246 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGA 42305 | | |||||| |||||||||| ||| | ||| || |||| || ||||| || | Sbjct 839256 ATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATA 839315 Query 42306 GATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTG 42365 | | |||| || ||| || | ||| ||||| || || || ||| | |||| Sbjct 839316 AGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTG 839375 Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425 | ||||||||||| || || || || || ||||||||| | || || | || || | Sbjct 839376 AGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCA 839435 Query 42426 CTTCTGTAC--AAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAA 42483 |||||| || ||| || ||| ||||||| || || ||||| || ||| ||| ||||| Sbjct 839436 CTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAA 839493 Query 42484 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAAT 42539 || ||||| ||| | || ||| || |||||| | || || |||||||||| Sbjct 839494 GAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTC-TCATTCATACGGTTATTCCAAT 839552 Query 42540 CATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTT 42599 ||| ||||| || |||| ||| | ||||| ||||||| || || || ||||| | | Sbjct 839553 CATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCT 839612 Query 42600 TATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTA 42649 ||||| | ||| || ||||| |||| |||||||| | |||||||||| Sbjct 839613 TATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 839662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139132886080