Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F000243375.1_202011-12- 08] 8 sequences; 9,220,678 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 4e-15 >seq5 Length=1086982 Score = 96.9 bits (106), Expect = 4e-15 Identities = 270/408 (66%), Gaps = 15/408 (4%) Strand=Plus/Minus Query 50438 TTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCA 50497 |||||||| || ||||| ||| |||||| || || || | | || | ||| Sbjct 839201 TTGAAGGTTATTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTC 839142 Query 50498 TAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAG 50557 ||||||| || || |||||| ||||| ||||| | | || ||||| | || || | Sbjct 839141 TAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCG 839082 Query 50558 ACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACAATT 50616 | ||||| ||| |||| || || | | |||| ||| | | | | | ||| Sbjct 839081 ATTTTGCATGT-----CTACTATTTGCTCATT--TGAAGAATAAGCCAGATCCTTCCATT 839029 Query 50617 TTGGACATGTTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTA 50673 | || | | | | ||||||||||| |||||||| || |||| || ||| || Sbjct 839028 ATCGAAAAGATTATTACTGAAGCCGTCGAGATCGAAAAGAGGTACTTCATCGATGCTCTA 838969 Query 50674 CCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCA 50733 ||||| | || ||||| |||||||| ||| ||||| | ||||| ||||||| || || Sbjct 838968 CCCGTTTCTTTATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCT 838909 Query 50734 GACAGA-TTGTTGTTGC-AGCTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTC 50791 || ||| | | || || | || |||| ||||| | || | |||||| ||| Sbjct 838908 GATAGACTACTGGTCGCTTTCGGGAACAA--GAAATTTTTCAACGTGACTAACCCATTTG 838851 Query 50792 CGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50839 || ||| | ||||| ||| ||| || || || || |||||||||| Sbjct 838850 ATTTCATGGAGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAA 838803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014349298560